1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G58980

AT3G58980


Description : F-box family protein


Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58980
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G47920 No alias RNI-like superfamily protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58860 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58880 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59240 No alias RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G15620 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000820 regulation of glutamine family amino acid metabolic process IEP HCCA
BP GO:0000821 regulation of arginine metabolic process IEP HCCA
CC GO:0005815 microtubule organizing center IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006521 regulation of cellular amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008878 glucose-1-phosphate adenylyltransferase activity IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009652 thigmotropism IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
MF GO:0010307 acetylglutamate kinase regulator activity IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
BP GO:0033238 regulation of cellular amine metabolic process IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0042304 regulation of fatty acid biosynthetic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0062012 regulation of small molecule metabolic process IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0090368 regulation of ornithine metabolic process IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1900079 regulation of arginine biosynthetic process IEP HCCA
BP GO:2000013 regulation of arginine biosynthetic process via ornithine IEP HCCA
BP GO:2000282 regulation of cellular amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013101 Leu-rich_rpt_2 452 480
IPR013101 Leu-rich_rpt_2 153 179
IPR001810 F-box_dom 3 38
PLAZA 3.0 Dicots AT3G58980