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  5. AT3G61640

AT3G61640


Description : arabinogalactan protein 20


Gene families : OG_01_0004214 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G61640
Cluster HCCA: Cluster_77


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009612 response to mechanical stimulus RCA Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit IEP HCCA
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
BP GO:0002683 negative regulation of immune system process IEP HCCA
BP GO:0002832 negative regulation of response to biotic stimulus IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005838 proteasome regulatory particle IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006354 DNA-templated transcription, elongation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009765 photosynthesis, light harvesting IEP HCCA
BP GO:0009769 photosynthesis, light harvesting in photosystem II IEP HCCA
BP GO:0010042 response to manganese ion IEP HCCA
BP GO:0010045 response to nickel cation IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
BP GO:0032102 negative regulation of response to external stimulus IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034051 negative regulation of plant-type hypersensitive response IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0045824 negative regulation of innate immune response IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0050777 negative regulation of immune response IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
BP GO:0080164 regulation of nitric oxide metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR009424 AGP16/20/22/41 30 62
PLAZA 3.0 Dicots AT3G61640