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  5. AT4G00230

AT4G00230


Description : xylem serine peptidase 1


Gene families : OG_01_0000026 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G00230
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AT1G30600 No alias Subtilase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g01740.1 No alias protease (SBT4) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_18770V3.1 No alias Subtilase family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03084.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IBA Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005618 cell wall IDA Interproscan
BP GO:0006508 proteolysis ISS Interproscan
BP GO:0008152 metabolic process IBA Interproscan
CC GO:0009505 plant-type cell wall IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
MF GO:0031176 endo-1,4-beta-xylanase activity IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
BP GO:2000280 regulation of root development IEP HCCA
InterPro domains Description Start Stop
IPR010259 S8pro/Inhibitor_I9 38 115
IPR000209 Peptidase_S8/S53_dom 137 587
PLAZA 3.0 Dicots AT4G00230