AT4G00600

Description : Amino acid dehydrogenase family protein

Gene families : OG_01_0000986 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000986_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G00600
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp8g03950.1	No alias	bifunctional 5,10-methylene-THF dehydrogenase and...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006760	folic acid-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009396	folic acid-containing compound biosynthetic process	ISS	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	None	Extended
BP	GO:0042558	pteridine-containing compound metabolic process	None	Extended
BP	GO:0042559	pteridine-containing compound biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004400	histidinol-phosphate transaminase activity	IEP	HCCA
MF	GO:0004638	phosphoribosylaminoimidazole carboxylase activity	IEP	HCCA
BP	GO:0006188	IMP biosynthetic process	IEP	HCCA
BP	GO:0006189	'de novo' IMP biosynthetic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	HCCA
CC	GO:0009320	phosphoribosylaminoimidazole carboxylase complex	IEP	HCCA
MF	GO:0009927	histidine phosphotransfer kinase activity	IEP	HCCA
CC	GO:0015934	large ribosomal subunit	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
CC	GO:0022625	cytosolic large ribosomal subunit	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0046040	IMP metabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020630	THF_DH/CycHdrlase_cat_dom	88	137
IPR020631	THF_DH/CycHdrlase_NAD-bd_dom	140	305

External Links

PLAZA 3.0 Dicots	AT4G00600

AT4G00600

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation