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  5. AT4G01820

AT4G01820


Description : P-glycoprotein 3


Gene families : OG_01_0000146 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G01820
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G47000 No alias ATP binding cassette subfamily B4 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28345 No alias ABC transporter family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28380 No alias P-glycoprotein 17 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G28415 No alias ABC transporter family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62150 No alias P-glycoprotein 21 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_16450V3.1 No alias ATP binding cassette subfamily B19 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004558 alpha-1,4-glucosidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010421 hydrogen peroxide-mediated programmed cell death IEP HCCA
MF GO:0015368 calcium:cation antiporter activity IEP HCCA
MF GO:0015369 calcium:proton antiporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016040 glutamate synthase (NADH) activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
BP GO:0019676 ammonia assimilation cycle IEP HCCA
BP GO:0019740 nitrogen utilization IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036473 cell death in response to oxidative stress IEP HCCA
BP GO:0036474 cell death in response to hydrogen peroxide IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
MF GO:0045181 glutamate synthase activity, NAD(P)H as acceptor IEP HCCA
CC GO:0045257 succinate dehydrogenase complex (ubiquinone) IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
CC GO:0045283 fumarate reductase complex IEP HCCA
MF GO:0050302 indole-3-acetaldehyde oxidase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP HCCA
BP GO:0072507 divalent inorganic cation homeostasis IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
MF GO:0090599 alpha-glucosidase activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 369 515
IPR003439 ABC_transporter-like_ATP-bd 1004 1153
IPR011527 ABC1_TM_dom 662 934
IPR011527 ABC1_TM_dom 26 295
PLAZA 3.0 Dicots AT4G01820