AT4G03510

Description : RING membrane-anchor 1

Gene families : OG_01_0001613 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G03510
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT4G28270	No alias	RING membrane-anchor 2	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g08340.1	No alias	RING-HC-class E3 ligase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IDA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0032527	protein exit from endoplasmic reticulum	IMP	Interproscan
BP	GO:0032940	secretion by cell	IGI	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046903	secretion	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:0140352	export from cell	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000018	regulation of DNA recombination	IEP	HCCA
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0000217	DNA secondary structure binding	IEP	HCCA
CC	GO:0000228	nuclear chromosome	IEP	HCCA
MF	GO:0000400	four-way junction DNA binding	IEP	HCCA
BP	GO:0000710	meiotic mismatch repair	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0004067	asparaginase activity	IEP	HCCA
MF	GO:0004106	chorismate mutase activity	IEP	HCCA
MF	GO:0004371	glycerone kinase activity	IEP	HCCA
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	HCCA
MF	GO:0004392	heme oxygenase (decyclizing) activity	IEP	HCCA
MF	GO:0004462	lactoylglutathione lyase activity	IEP	HCCA
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0005221	intracellular cyclic nucleotide activated cation channel activity	IEP	HCCA
MF	GO:0005223	intracellular cGMP-activated cation channel activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005522	profilin binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
CC	GO:0005769	early endosome	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	HCCA
BP	GO:0006007	glucose catabolic process	IEP	HCCA
BP	GO:0006040	amino sugar metabolic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006152	purine nucleoside catabolic process	IEP	HCCA
BP	GO:0006290	pyrimidine dimer repair	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006516	glycoprotein catabolic process	IEP	HCCA
BP	GO:0006528	asparagine metabolic process	IEP	HCCA
BP	GO:0006530	asparagine catabolic process	IEP	HCCA
BP	GO:0006563	L-serine metabolic process	IEP	HCCA
BP	GO:0006788	heme oxidation	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0007602	phototransduction	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0008780	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity	IEP	HCCA
BP	GO:0009065	glutamine family amino acid catabolic process	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0009164	nucleoside catabolic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009585	red, far-red light phototransduction	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009895	negative regulation of catabolic process	IEP	HCCA
BP	GO:0009970	cellular response to sulfate starvation	IEP	HCCA
CC	GO:0010009	cytoplasmic side of endosome membrane	IEP	HCCA
BP	GO:0010019	chloroplast-nucleus signaling pathway	IEP	HCCA
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010225	response to UV-C	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
BP	GO:0016482	cytosolic transport	IEP	HCCA
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018126	protein hydroxylation	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019433	triglyceride catabolic process	IEP	HCCA
BP	GO:0019511	peptidyl-proline hydroxylation	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0030581	symbiont intracellular protein transport in host	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
CC	GO:0031371	ubiquitin conjugating enzyme complex	IEP	HCCA
CC	GO:0031372	UBC13-MMS2 complex	IEP	HCCA
MF	GO:0032135	DNA insertion or deletion binding	IEP	HCCA
MF	GO:0032137	guanine/thymine mispair binding	IEP	HCCA
MF	GO:0032138	single base insertion or deletion binding	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
CC	GO:0032300	mismatch repair complex	IEP	HCCA
CC	GO:0032301	MutSalpha complex	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0033345	asparagine catabolic process via L-aspartate	IEP	HCCA
MF	GO:0033549	MAP kinase phosphatase activity	IEP	HCCA
BP	GO:0034644	cellular response to UV	IEP	HCCA
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
BP	GO:0042177	negative regulation of protein catabolic process	IEP	HCCA
BP	GO:0042278	purine nucleoside metabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043407	negative regulation of MAP kinase activity	IEP	HCCA
BP	GO:0043408	regulation of MAPK cascade	IEP	HCCA
BP	GO:0043409	negative regulation of MAPK cascade	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043570	maintenance of DNA repeat elements	IEP	HCCA
MF	GO:0043855	cyclic nucleotide-gated ion channel activity	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0045022	early endosome to late endosome transport	IEP	HCCA
BP	GO:0045910	negative regulation of DNA recombination	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
BP	GO:0046461	neutral lipid catabolic process	IEP	HCCA
BP	GO:0046464	acylglycerol catabolic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046503	glycerolipid catabolic process	IEP	HCCA
MF	GO:0047974	guanosine deaminase activity	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0051053	negative regulation of DNA metabolic process	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
BP	GO:0051202	phytochromobilin metabolic process	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051701	biological process involved in interaction with host	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
BP	GO:0071494	cellular response to UV-C	IEP	HCCA
CC	GO:0071944	cell periphery	IEP	HCCA
BP	GO:0072523	purine-containing compound catabolic process	IEP	HCCA
BP	GO:0080034	host response to induction by symbiont of tumor, nodule or growth in host	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
CC	GO:0098552	side of membrane	IEP	HCCA
CC	GO:0098562	cytoplasmic side of membrane	IEP	HCCA
BP	GO:0098927	vesicle-mediated transport between endosomal compartments	IEP	HCCA
MF	GO:0099094	ligand-gated cation channel activity	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
CC	GO:1990391	DNA repair complex	IEP	HCCA
BP	GO:2001289	lipid X metabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT4G03510

AT4G03510

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation