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  5. AT1G17150

AT1G17150


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0000396 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G17150
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT2G26620 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G07830 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEP HCCA
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP HCCA
MF GO:0004029 aldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004030 aldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004031 aldehyde oxidase activity IEP HCCA
MF GO:0004156 dihydropteroate synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009685 gibberellin metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0009996 negative regulation of cell fate specification IEP HCCA
BP GO:0010023 proanthocyanidin biosynthetic process IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010061 regulation of trichoblast fate specification IEP HCCA
BP GO:0010062 negative regulation of trichoblast fate specification IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
BP GO:0010453 regulation of cell fate commitment IEP HCCA
BP GO:0010454 negative regulation of cell fate commitment IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
BP GO:0016101 diterpenoid metabolic process IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016623 oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0018479 benzaldehyde dehydrogenase (NAD+) activity IEP HCCA
MF GO:0018488 aryl-aldehyde oxidase activity IEP HCCA
MF GO:0019115 benzaldehyde dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0042659 regulation of cell fate specification IEP HCCA
CC GO:0043076 megasporocyte nucleus IEP HCCA
CC GO:0043078 polar nucleus IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0048317 seed morphogenesis IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
MF GO:0050362 L-tryptophan:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070529 L-tryptophan aminotransferase activity IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
MF GO:0080097 L-tryptophan:pyruvate aminotransferase activity IEP HCCA
BP GO:0080113 regulation of seed growth IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903888 regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1903889 negative regulation of plant epidermal cell differentiation IEP HCCA
BP GO:1905421 regulation of plant organ morphogenesis IEP HCCA
BP GO:2000014 regulation of endosperm development IEP HCCA
BP GO:2000067 regulation of root morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 60 389
PLAZA 3.0 Dicots AT1G17150