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Description : RING/U-box superfamily protein
Gene families : OG_01_0000140 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000140_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G09130 | |
| Cluster | HCCA: Cluster_199 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G09120 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT4G40070 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000257 | nitrilase activity | IEP | HCCA |
| MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| BP | GO:0009685 | gibberellin metabolic process | IEP | HCCA |
| BP | GO:0009686 | gibberellin biosynthetic process | IEP | HCCA |
| BP | GO:0009970 | cellular response to sulfate starvation | IEP | HCCA |
| BP | GO:0010054 | trichoblast differentiation | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016101 | diterpenoid metabolic process | IEP | HCCA |
| BP | GO:0016102 | diterpenoid biosynthetic process | IEP | HCCA |
| BP | GO:0016145 | S-glycoside catabolic process | IEP | HCCA |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | HCCA |
| MF | GO:0016815 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0018822 | nitrile hydratase activity | IEP | HCCA |
| BP | GO:0019759 | glycosinolate catabolic process | IEP | HCCA |
| BP | GO:0019762 | glucosinolate catabolic process | IEP | HCCA |
| BP | GO:0031110 | regulation of microtubule polymerization or depolymerization | IEP | HCCA |
| BP | GO:0032886 | regulation of microtubule-based process | IEP | HCCA |
| BP | GO:0044273 | sulfur compound catabolic process | IEP | HCCA |
| BP | GO:0048768 | root hair cell tip growth | IEP | HCCA |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | HCCA |
| BP | GO:0070507 | regulation of microtubule cytoskeleton organization | IEP | HCCA |
| MF | GO:0080061 | indole-3-acetonitrile nitrilase activity | IEP | HCCA |
| MF | GO:0080109 | indole-3-acetonitrile nitrile hydratase activity | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901658 | glycosyl compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 119 | 162 |
| PLAZA 3.0 Dicots | AT4G09130 |