1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G10400

AT4G10400


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10400
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AT1G19410 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G56780 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G11370 No alias FBD / Leucine Rich Repeat domains containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G60610 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000912 assembly of actomyosin apparatus involved in cytokinesis IEP HCCA
BP GO:0000914 phragmoplast assembly IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004526 ribonuclease P activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005456 CMP-N-acetylneuraminate transmembrane transporter activity IEP HCCA
CC GO:0005677 chromatin silencing complex IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
MF GO:0015136 sialic acid transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015739 sialic acid transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0031109 microtubule polymerization or depolymerization IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032451 demethylase activity IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0032506 cytokinetic process IEP HCCA
MF GO:0035514 DNA demethylase activity IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0046785 microtubule polymerization IEP HCCA
BP GO:0048768 root hair cell tip growth IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071470 cellular response to osmotic stress IEP HCCA
BP GO:0071472 cellular response to salt stress IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
BP GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis IEP HCCA
BP GO:1902410 mitotic cytokinetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 37
IPR013101 Leu-rich_rpt_2 152 177
IPR006566 FBD 333 378
PLAZA 3.0 Dicots AT4G10400