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  5. AT4G10560

AT4G10560


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG_01_0000059 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10560
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G29180 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G53340 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02610 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02620 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02680 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G02690 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G13895 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28460 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10370 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26380 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02360 No alias DC1 domain-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G03355 No alias No description available 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G03360 No alias DC1 domain-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G55780 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0009793 embryo development ending in seed dormancy IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006649 phospholipid transfer to membrane IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009650 UV protection IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010500 transmitting tissue development IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048462 carpel formation IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:2000028 regulation of photoperiodism, flowering IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 329 377
IPR004146 DC1 531 578
IPR004146 DC1 587 636
IPR004146 DC1 275 319
IPR004146 DC1 413 463
PLAZA 3.0 Dicots AT4G10560