1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G10890

AT4G10890


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0003439 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003439_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G10890
Cluster HCCA: Cluster_257


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0003002 regionalization IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004549 tRNA-specific ribonuclease activity IEP HCCA
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0004815 aspartate-tRNA ligase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006349 regulation of gene expression by genetic imprinting IEP HCCA
BP GO:0006379 mRNA cleavage IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008469 histone-arginine N-methyltransferase activity IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009875 pollen-pistil interaction IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010449 root meristem growth IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010589 leaf proximal/distal pattern formation IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016273 arginine N-methyltransferase activity IEP HCCA
MF GO:0016274 protein-arginine N-methyltransferase activity IEP HCCA
MF GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016569 obsolete covalent chromatin modification IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP HCCA
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018195 peptidyl-arginine modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018216 peptidyl-arginine methylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0023052 signaling IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0034969 histone arginine methylation IEP HCCA
BP GO:0034970 histone H3-R2 methylation IEP HCCA
BP GO:0034971 histone H3-R17 methylation IEP HCCA
BP GO:0034972 histone H3-R26 methylation IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
MF GO:0035241 protein-arginine omega-N monomethyltransferase activity IEP HCCA
MF GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity IEP HCCA
BP GO:0035246 peptidyl-arginine N-methylation IEP HCCA
BP GO:0035247 peptidyl-arginine omega-N-methylation IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0035279 mRNA cleavage involved in gene silencing by miRNA IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042330 taxis IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048569 post-embryonic animal organ development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0071514 genetic imprinting IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140458 pre-transcriptional gene silencing by RNA IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000012 regulation of auxin polar transport IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR018838 DUF2439 246 316
IPR027806 HARBI1_dom 71 164
PLAZA 3.0 Dicots AT4G10890