Coexpression cluster: Cluster_257 (HCCA)

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Average Expression Profile



Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0140546 defense response to symbiont 10.0% (6/60) 4.19 1e-06 0.000274
GO:0051607 defense response to virus 10.0% (6/60) 4.19 1e-06 0.000274
GO:0009616 RNAi-mediated antiviral immune response 8.33% (5/60) 4.51 3e-06 0.000399
GO:0010267 production of ta-siRNAs involved in RNA interference 8.33% (5/60) 4.38 4e-06 0.000508
GO:0009615 response to virus 10.0% (6/60) 3.93 3e-06 0.000525
GO:0070918 production of small RNA involved in gene silencing by RNA 8.33% (5/60) 4.01 1.5e-05 0.000582
GO:0031050 dsRNA processing 8.33% (5/60) 4.01 1.5e-05 0.000582
GO:0030422 production of siRNA involved in RNA interference 8.33% (5/60) 4.04 1.4e-05 0.000606
GO:0010050 vegetative phase change 6.67% (4/60) 4.8 1.3e-05 0.000634
GO:0035196 production of miRNAs involved in gene silencing by miRNA 8.33% (5/60) 4.17 9e-06 0.000637
GO:0090304 nucleic acid metabolic process 25.0% (15/60) 1.91 7e-06 0.000648
GO:0006955 immune response 10.0% (6/60) 3.54 1.3e-05 0.000686
GO:0006139 nucleobase-containing compound metabolic process 28.33% (17/60) 1.71 9e-06 0.000725
GO:0045087 innate immune response 10.0% (6/60) 3.58 1.1e-05 0.000726
GO:0006310 DNA recombination 10.0% (6/60) 3.54 1.3e-05 0.000737
GO:0016441 posttranscriptional gene silencing 8.33% (5/60) 3.9 2.1e-05 0.00078
GO:0006259 DNA metabolic process 13.33% (8/60) 2.73 2.6e-05 0.0009
GO:0046483 heterocycle metabolic process 28.33% (17/60) 1.49 6.3e-05 0.002056
GO:0002376 immune system process 10.0% (6/60) 2.99 0.000109 0.003349
GO:0010608 posttranscriptional regulation of gene expression 8.33% (5/60) 3.34 0.000135 0.003573
GO:0034641 cellular nitrogen compound metabolic process 28.33% (17/60) 1.4 0.000131 0.003641
GO:1901360 organic cyclic compound metabolic process 30.0% (18/60) 1.34 0.000131 0.003812
GO:0010629 negative regulation of gene expression 10.0% (6/60) 2.81 0.000211 0.005338
GO:0006725 cellular aromatic compound metabolic process 28.33% (17/60) 1.34 0.000229 0.005566
GO:0007062 sister chromatid cohesion 6.67% (4/60) 3.71 0.000253 0.0059
GO:0006396 RNA processing 13.33% (8/60) 2.24 0.000273 0.00612
GO:0016070 RNA metabolic process 16.67% (10/60) 1.74 0.000731 0.015779
GO:0007389 pattern specification process 8.33% (5/60) 2.77 0.000845 0.017594
GO:0023052 signaling 5.0% (3/60) 3.71 0.001598 0.029115
GO:0051276 chromosome organization 6.67% (4/60) 3.02 0.001504 0.029232
GO:0007267 cell-cell signaling 5.0% (3/60) 3.72 0.001555 0.029248
GO:0009887 animal organ morphogenesis 5.0% (3/60) 3.75 0.001472 0.029587
GO:0140097 catalytic activity, acting on DNA 5.0% (3/60) 3.67 0.001731 0.030581
GO:0005768 endosome 6.67% (4/60) 2.87 0.002201 0.032073
GO:0005819 spindle 3.33% (2/60) 4.94 0.001936 0.032254
GO:0000009 alpha-1,6-mannosyltransferase activity 1.67% (1/60) 8.85 0.00217 0.032433
GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity 1.67% (1/60) 8.85 0.00217 0.032433
GO:0070259 tyrosyl-DNA phosphodiesterase activity 1.67% (1/60) 8.85 0.00217 0.032433
GO:1903046 meiotic cell cycle process 6.67% (4/60) 2.92 0.001929 0.03307
GO:0010605 negative regulation of macromolecule metabolic process 10.0% (6/60) 2.17 0.002101 0.034024
GO:0031410 cytoplasmic vesicle 6.67% (4/60) 2.78 0.002748 0.035596
GO:0097708 intracellular vesicle 6.67% (4/60) 2.78 0.002748 0.035596
GO:0033044 regulation of chromosome organization 5.0% (3/60) 3.43 0.002734 0.037068
GO:0007059 chromosome segregation 5.0% (3/60) 3.43 0.002734 0.037068
GO:0051128 regulation of cellular component organization 6.67% (4/60) 2.76 0.002936 0.03721
GO:0009892 negative regulation of metabolic process 10.0% (6/60) 2.11 0.002645 0.037604
GO:0140527 reciprocal homologous recombination 5.0% (3/60) 3.35 0.003244 0.038596
GO:0007131 reciprocal meiotic recombination 5.0% (3/60) 3.35 0.003244 0.038596
GO:0031982 vesicle 6.67% (4/60) 2.72 0.003174 0.039366
GO:0035825 homologous recombination 5.0% (3/60) 3.32 0.00338 0.039409
GO:0048519 negative regulation of biological process 13.33% (8/60) 1.66 0.0036 0.040363
GO:0051726 regulation of cell cycle 6.67% (4/60) 2.66 0.003688 0.040563
GO:0098542 defense response to other organism 11.67% (7/60) 1.8 0.003874 0.041069
GO:0008094 ATP-dependent activity, acting on DNA 3.33% (2/60) 4.49 0.003595 0.041091
GO:0006974 cellular response to DNA damage stimulus 6.67% (4/60) 2.64 0.003871 0.04179
GO:0090057 root radial pattern formation 1.67% (1/60) 7.85 0.004335 0.044334
GO:0032389 MutLalpha complex 1.67% (1/60) 7.85 0.004335 0.044334
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_5 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_7 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_11 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_24 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_27 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_36 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_38 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_42 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_54 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_64 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_72 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_101 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_130 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_133 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_139 0.038 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_149 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_194 0.026 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_204 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_218 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_221 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_232 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_248 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_252 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_258 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_263 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_292 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_109 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_158 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_167 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_173 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_40 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_104 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_126 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_29 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_33 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_122 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_160 0.024 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_163 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_217 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_242 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_302 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_56 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_72 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_108 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_119 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (60) (download table)



InterPro Domains



GO Terms



Family Terms