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AT4G14540


Description : nuclear factor Y, subunit B3


Gene families : OG_01_0000454 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G14540
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Pp3c3_14260V3.1 No alias nuclear factor Y, subunit B3 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000412 histone peptidyl-prolyl isomerization IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0009295 nucleoid IEP HCCA
MF GO:0009496 plastoquinol--plastocyanin reductase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009508 plastid chromosome IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP HCCA
BP GO:0010423 negative regulation of brassinosteroid biosynthetic process IEP HCCA
CC GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) IEP HCCA
BP GO:0010894 negative regulation of steroid biosynthetic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019218 regulation of steroid metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032350 regulation of hormone metabolic process IEP HCCA
BP GO:0032351 negative regulation of hormone metabolic process IEP HCCA
BP GO:0032353 negative regulation of hormone biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045833 negative regulation of lipid metabolic process IEP HCCA
BP GO:0045939 negative regulation of steroid metabolic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0046885 regulation of hormone biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0050810 regulation of steroid biosynthetic process IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
MF GO:0052880 oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0090032 negative regulation of steroid hormone biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1904062 regulation of cation transmembrane transport IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 25 89
PLAZA 3.0 Dicots AT4G14540