AT4G18290

Description : potassium channel in Arabidopsis thaliana 2

Gene families : OG_01_0000278 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18290
Cluster	HCCA: Cluster_188

Target	Alias	Description	ECC score	Gene Family Method
AT2G26650	No alias	K+ transporter 1	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22200	No alias	potassium transport 2/3	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_16190V3.1	No alias	K+ transporter 1	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005242	inward rectifier potassium channel activity	IDA	Interproscan
MF	GO:0005242	inward rectifier potassium channel activity	ISS	Interproscan
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005249	voltage-gated potassium channel activity	None	Extended
MF	GO:0005261	cation channel activity	None	Extended
MF	GO:0005267	potassium channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	ISS	Interproscan
BP	GO:0007623	circadian rhythm	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009644	response to high light intensity	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010118	stomatal movement	IMP	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015079	potassium ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022843	voltage-gated cation channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0099094	ligand-gated cation channel activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002213	defense response to insect	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
CC	GO:0005615	extracellular space	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008447	L-ascorbate oxidase activity	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009943	adaxial/abaxial axis specification	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
BP	GO:0010358	leaf shaping	IEP	HCCA
BP	GO:0016145	S-glycoside catabolic process	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0019137	thioglucosidase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0019759	glycosinolate catabolic process	IEP	HCCA
BP	GO:0019762	glucosinolate catabolic process	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0030148	sphingolipid biosynthetic process	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046519	sphingoid metabolic process	IEP	HCCA
BP	GO:0046520	sphingoid biosynthetic process	IEP	HCCA
BP	GO:0048532	anatomical structure arrangement	IEP	HCCA
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901658	glycosyl compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	397	481
IPR005821	Ion_trans_dom	62	306
IPR021789	KHA_dom	628	691

External Links

PLAZA 3.0 Dicots	AT4G18290

AT4G18290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation