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AT4G21430


Description : Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase


Gene families : OG_01_0000628 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G21430
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Pp3c17_5410V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP HCCA
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated ion channel activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006955 immune response IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008301 DNA binding, bending IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010081 regulation of inflorescence meristem growth IEP HCCA
BP GO:0010115 regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010116 positive regulation of abscisic acid biosynthetic process IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0010371 regulation of gibberellin biosynthetic process IEP HCCA
BP GO:0010373 negative regulation of gibberellin biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated ion channel activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0018345 protein palmitoylation IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019747 regulation of isoprenoid metabolic process IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031099 regeneration IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
BP GO:0031936 obsolete negative regulation of chromatin silencing IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0035510 DNA dealkylation IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045827 negative regulation of isoprenoid metabolic process IEP HCCA
BP GO:0045828 positive regulation of isoprenoid metabolic process IEP HCCA
BP GO:0045833 negative regulation of lipid metabolic process IEP HCCA
BP GO:0045834 positive regulation of lipid metabolic process IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046167 glycerol-3-phosphate biosynthetic process IEP HCCA
BP GO:0046889 positive regulation of lipid biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051055 negative regulation of lipid biosynthetic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0062013 positive regulation of small molecule metabolic process IEP HCCA
BP GO:0062014 negative regulation of small molecule metabolic process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070988 demethylation IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
BP GO:0080111 DNA demethylation IEP HCCA
BP GO:0080188 gene silencing by RNA-directed DNA methylation IEP HCCA
BP GO:0140458 pre-transcriptional gene silencing by RNA IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1902930 regulation of alcohol biosynthetic process IEP HCCA
BP GO:1902932 positive regulation of alcohol biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 765 860
IPR014977 WRC_dom 8 49
PLAZA 3.0 Dicots AT4G21430