1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G21890

AT4G21890


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; Has 14 Blast hits to 14 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0000987 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G21890
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Mp8g08740.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040014 regulation of multicellular organism growth IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048467 gynoecium development IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G21890