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AT4G25910


Description : NFU domain protein 3


Gene families : OG_01_0004322 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G25910
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Zci_14524.1 No alias scaffold protein NFU of plastidial SUF system transfer phase 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009658 chloroplast organization ISS Interproscan
BP GO:0016226 iron-sulfur cluster assembly IGI Interproscan
BP GO:0016226 iron-sulfur cluster assembly ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004033 aldo-keto reductase (NADP) activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
MF GO:0010349 L-galactose dehydrogenase activity IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001075 NIF_FeS_clus_asmbl_NifU_C 89 154
IPR001075 NIF_FeS_clus_asmbl_NifU_C 171 232
PLAZA 3.0 Dicots AT4G25910