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  5. AT4G26340

AT4G26340


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG_01_0000027 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G26340
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT1G50980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G55030 No alias RNI-like superfamily protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G10750 No alias FBD domain family 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G12840 No alias unknown protein; Has 0 Blast hits to 0 proteins in 0... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49020 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49030 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49040 No alias F-box/RNI-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G49045 No alias No description available 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G00315 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10410 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G13965 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G26350 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38570 No alias F-box/RNI-like superfamily protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38590 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44850 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G50270 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56325 No alias FBD-like domain family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56370 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56380 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56390 No alias F-box/RNI-like/FBD-like domains-containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56400 No alias FBD, F-box, Skp2-like and Leucine Rich Repeat domains... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56410 No alias Protein with RNI-like/FBD-like domains 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56430 No alias F-box/FBD-like domains containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56452 No alias FBD-like domain family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56560 No alias FBD, F-box and Leucine Rich Repeat domains containing protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56570 No alias Leucine-rich repeat (LRR) family protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56700 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G56820 No alias F-box/RNI-like/FBD-like domains-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G62970 No alias Protein with RNI-like/FBD-like domains 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005253 anion channel activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080159 zygote elongation IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 38
IPR006566 FBD 343 387
IPR013101 Leu-rich_rpt_2 151 176
PLAZA 3.0 Dicots AT4G26340