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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Gene families : OG_01_0012119 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT4G26990 | |
| Cluster | HCCA: Cluster_220 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000059 | obsolete protein import into nucleus, docking | IEP | HCCA |
| CC | GO:0000418 | RNA polymerase IV complex | IEP | HCCA |
| MF | GO:0003720 | telomerase activity | IEP | HCCA |
| MF | GO:0003721 | telomerase RNA reverse transcriptase activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003727 | single-stranded RNA binding | IEP | HCCA |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004609 | phosphatidylserine decarboxylase activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | HCCA |
| BP | GO:0006302 | double-strand break repair | IEP | HCCA |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin assembly | IEP | HCCA |
| BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | HCCA |
| BP | GO:0007004 | telomere maintenance via telomerase | IEP | HCCA |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | HCCA |
| MF | GO:0008266 | poly(U) RNA binding | IEP | HCCA |
| CC | GO:0009295 | nucleoid | IEP | HCCA |
| BP | GO:0010495 | long-distance posttranscriptional gene silencing | IEP | HCCA |
| BP | GO:0010833 | telomere maintenance via telomere lengthening | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016569 | obsolete covalent chromatin modification | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0034599 | cellular response to oxidative stress | IEP | HCCA |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | HCCA |
| BP | GO:0048446 | petal morphogenesis | IEP | HCCA |
| BP | GO:0048451 | petal formation | IEP | HCCA |
| BP | GO:0048453 | sepal formation | IEP | HCCA |
| BP | GO:0050000 | chromosome localization | IEP | HCCA |
| BP | GO:0051026 | chiasma assembly | IEP | HCCA |
| BP | GO:0051131 | chaperone-mediated protein complex assembly | IEP | HCCA |
| BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
| BP | GO:0060341 | regulation of cellular localization | IEP | HCCA |
| BP | GO:0070407 | oxidation-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
| BP | GO:0080154 | regulation of fertilization | IEP | HCCA |
| BP | GO:0080155 | regulation of double fertilization forming a zygote and endosperm | IEP | HCCA |
| BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | HCCA |
| BP | GO:0140458 | pre-transcriptional gene silencing by RNA | IEP | HCCA |
| BP | GO:2000008 | regulation of protein localization to cell surface | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025852 | SM_dom_ATX | 23 | 99 |
| PLAZA 3.0 Dicots | AT4G26990 |