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  5. AT4G27900

AT4G27900


Description : CCT motif family protein


Gene families : OG_01_0000689 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G27900
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
Mp1g16040.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_34580V3.1 No alias CCT motif family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0002376 immune system process IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP HCCA
MF GO:0005372 water transmembrane transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008506 sucrose:proton symporter activity IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
MF GO:0009669 sucrose:cation symporter activity IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010234 anther wall tapetum cell fate specification IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 posttranscriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0015225 biotin transmembrane transporter activity IEP HCCA
MF GO:0015250 water channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016246 RNA interference IEP HCCA
BP GO:0016441 posttranscriptional gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035194 post-transcriptional gene silencing by RNA IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046685 response to arsenic-containing substance IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 214 256
PLAZA 3.0 Dicots AT4G27900