AT4G28860


Description : casein kinase I-like 4


Gene families : OG_01_0015615 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28860
Cluster HCCA: Cluster_203


Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IDA Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0009637 response to blue light IEP Interproscan
BP GO:0009640 photomorphogenesis IMP Interproscan
BP GO:0009785 blue light signaling pathway IMP Interproscan
MF GO:0016301 kinase activity ISS Interproscan
BP GO:0046777 protein autophosphorylation IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
MF GO:0003958 NADPH-hemoprotein reductase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006470 protein dephosphorylation IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006513 protein monoubiquitination IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0007041 lysosomal transport IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008333 endosome to lysosome transport IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009861 jasmonic acid and ethylene-dependent systemic resistance IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009958 positive gravitropism IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
BP GO:0010390 histone monoubiquitination IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016262 protein N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0016574 histone ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
CC GO:0030904 retromer complex IEP HCCA
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0033523 histone H2B ubiquitination IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 9 227
PLAZA 3.0 Dicots AT4G28860