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  5. AT4G29520

AT4G29520


Description : LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Saposin B (InterPro:IPR008139); Has 137 Blast hits to 137 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 41; Fungi - 10; Plants - 36; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).


Gene families : OG_01_0006545 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G29520
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cre03.g151700 No alias No description available 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g02870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_19450V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04291.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
CC GO:0000326 protein storage vacuole IEP HCCA
CC GO:0000327 lytic vacuole within protein storage vacuole IEP HCCA
BP GO:0000741 karyogamy IEP HCCA
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005788 endoplasmic reticulum lumen IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006857 oligopeptide transport IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0006997 nucleus organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009735 response to cytokinin IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010197 polar nucleus fusion IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015833 peptide transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0042886 amide transport IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048284 organelle fusion IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0052033 obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0140352 export from cell IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G29520