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  5. AT4G30260

AT4G30260


Description : Integral membrane Yip1 family protein


Gene families : OG_01_0002114 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30260
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Pp3c7_23220V3.1 No alias Integral membrane Yip1 family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0015774 polysaccharide transport IGI Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
MF GO:0000254 C-4 methylsterol oxidase activity IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006333 chromatin assembly or disassembly IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006900 vesicle budding from membrane IEP HCCA
BP GO:0006983 ER overload response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
BP GO:0009608 response to symbiont IEP HCCA
BP GO:0009610 response to symbiotic fungus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009663 plasmodesma organization IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP HCCA
CC GO:0098573 intrinsic component of mitochondrial membrane IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR006977 Yip1 130 261
PLAZA 3.0 Dicots AT4G30260