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  5. AT4G30480

AT4G30480


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0007057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30480
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Mp4g15030.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
MF GO:0051879 Hsp90 protein binding IPI Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000811 GINS complex IEP HCCA
BP GO:0000913 preprophase band assembly IEP HCCA
BP GO:0001676 long-chain fatty acid metabolic process IEP HCCA
BP GO:0002213 defense response to insect IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009432 SOS response IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009626 plant-type hypersensitive response IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010225 response to UV-C IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019789 SUMO transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0030865 cortical cytoskeleton organization IEP HCCA
CC GO:0031261 DNA replication preinitiation complex IEP HCCA
BP GO:0031401 positive regulation of protein modification process IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
BP GO:0032270 positive regulation of cellular protein metabolic process IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034050 programmed cell death induced by symbiont IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045931 positive regulation of mitotic cell cycle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047627 adenylylsulfatase activity IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051702 biological process involved in interaction with symbiont IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060249 anatomical structure homeostasis IEP HCCA
BP GO:0060250 germ-line stem-cell niche homeostasis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070919 production of siRNA involved in gene silencing by small RNA IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-dependent DNA replication IEP HCCA
MF GO:0098772 molecular function regulator IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP HCCA
BP GO:2000539 regulation of protein geranylgeranylation IEP HCCA
BP GO:2000541 positive regulation of protein geranylgeranylation IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G30480