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  5. AT4G32560

AT4G32560


Description : paramyosin-related


Gene families : OG_01_0006930 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G32560
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_19840V3.1 No alias paramyosin-related 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000009 alpha-1,6-mannosyltransferase activity IEP HCCA
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0000175 3'-5'-exoribonuclease activity IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
MF GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity IEP HCCA
MF GO:0004078 biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004532 exoribonuclease activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004660 protein farnesyltransferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
CC GO:0005965 protein farnesyltransferase complex IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006730 one-carbon metabolic process IEP HCCA
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0008841 dihydrofolate synthase activity IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009934 regulation of meristem structural organization IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0018271 biotin-protein ligase activity IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036503 ERAD pathway IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0042966 biotin carboxyl carrier protein biosynthetic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0043624 cellular protein complex disassembly IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G32560