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  5. AT4G38640

AT4G38640


Description : Plasma-membrane choline transporter family protein


Gene families : OG_01_0005393 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38640
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
Cre14.g617800 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006499 N-terminal protein myristoylation RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000919 cell plate assembly IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005797 Golgi medial cisterna IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006108 malate metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006878 cellular copper ion homeostasis IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006898 receptor-mediated endocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010104 regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP HCCA
BP GO:0015986 ATP synthesis coupled proton transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016652 oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
MF GO:0017040 N-acylsphingosine amidohydrolase activity IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0030054 cell junction IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030139 endocytic vesicle IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0031985 Golgi cisterna IEP HCCA
BP GO:0032119 sequestering of zinc ion IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042814 monopolar cell growth IEP HCCA
BP GO:0043181 vacuolar sequestering IEP HCCA
CC GO:0043230 extracellular organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043424 protein histidine kinase binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045334 clathrin-coated endocytic vesicle IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051238 sequestering of metal ion IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0051262 protein tetramerization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
CC GO:0051286 cell tip IEP HCCA
BP GO:0051289 protein homotetramerization IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
MF GO:0051740 ethylene binding IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
CC GO:0060187 cell pole IEP HCCA
CC GO:0065010 extracellular membrane-bounded organelle IEP HCCA
CC GO:0070062 extracellular exosome IEP HCCA
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070297 regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0072328 alkene binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072583 clathrin-dependent endocytosis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901703 protein localization involved in auxin polar transport IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902532 negative regulation of intracellular signal transduction IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1903561 extracellular vesicle IEP HCCA
InterPro domains Description Start Stop
IPR007603 Choline_transptr-like 215 522
PLAZA 3.0 Dicots AT4G38640