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AT4G39220


Description : Rer1 family protein


Gene families : OG_01_0002772 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39220
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Cre12.g555350 No alias Protein RER1C OS=Arabidopsis thaliana 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12172.1 No alias membrane protein cargo receptor (RER1) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IMP Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0000254 C-4 methylsterol oxidase activity IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
CC GO:0005623 obsolete cell IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
MF GO:0008805 carbon-monoxide oxygenase activity IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009903 chloroplast avoidance movement IEP HCCA
BP GO:0010064 embryonic shoot morphogenesis IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016622 oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0017057 6-phosphogluconolactonase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
BP GO:0046835 carbohydrate phosphorylation IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
MF GO:0051766 inositol trisphosphate kinase activity IEP HCCA
BP GO:0051775 response to redox state IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP HCCA
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP HCCA
BP GO:0052746 inositol phosphorylation IEP HCCA
BP GO:0071461 cellular response to redox state IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0080065 4-alpha-methyl-delta7-sterol oxidation IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004932 Rer1 19 181
PLAZA 3.0 Dicots AT4G39220