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  5. AT4G39560

AT4G39560


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0000018 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39560
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT3G46050 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005451 monovalent cation:proton antiporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009942 longitudinal axis specification IEP HCCA
BP GO:0009945 radial axis specification IEP HCCA
BP GO:0009960 endosperm development IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010187 negative regulation of seed germination IEP HCCA
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP HCCA
MF GO:0010348 lithium:proton antiporter activity IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0010352 lithium ion export across the plasma membrane IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0046786 viral replication complex formation and maintenance IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
MF GO:0051139 metal ion:proton antiporter activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070839 metal ion export IEP HCCA
BP GO:0080050 regulation of seed development IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0140115 export across plasma membrane IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:2000033 regulation of seed dormancy process IEP HCCA
BP GO:2000034 regulation of seed maturation IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 27 71
IPR006652 Kelch_1 120 162
IPR006652 Kelch_1 166 206
PLAZA 3.0 Dicots AT4G39560