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  5. AT4G39900

AT4G39900


Description : unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG_01_0016613 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39900
Cluster HCCA: Cluster_76


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000419 RNA polymerase V complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004551 nucleotide diphosphatase activity IEP HCCA
MF GO:0005539 glycosaminoglycan binding IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005819 spindle IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006955 immune response IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
CC GO:0016591 RNA polymerase II, holoenzyme IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
MF GO:0042834 peptidoglycan binding IEP HCCA
MF GO:0043530 adenosine 5'-monophosphoramidase activity IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
MF GO:0047627 adenylylsulfatase activity IEP HCCA
MF GO:0047710 bis(5'-adenosyl)-triphosphatase activity IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT4G39900