AT1G03000

Description : peroxin 6

Gene families : OG_01_0008313 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008313_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03000
Cluster	HCCA: Cluster_139

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c17_21090V3.1	No alias	peroxin 6	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006625	protein targeting to peroxisome	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	IMP	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007031	peroxisome organization	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015919	peroxisomal membrane transport	None	Extended
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
BP	GO:0016558	protein import into peroxisome matrix	IMP	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
BP	GO:0017038	protein import	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043574	peroxisomal transport	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044743	protein transmembrane import into intracellular organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072662	protein localization to peroxisome	None	Extended
BP	GO:0072663	establishment of protein localization to peroxisome	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
BP	GO:0000578	embryonic axis specification	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
MF	GO:0003968	RNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0004156	dihydropteroate synthase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004525	ribonuclease III activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004673	protein histidine kinase activity	IEP	HCCA
MF	GO:0005034	osmosensor activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin assembly	IEP	HCCA
BP	GO:0006360	transcription by RNA polymerase I	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006475	internal protein amino acid acetylation	IEP	HCCA
BP	GO:0006555	methionine metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006885	regulation of pH	IEP	HCCA
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006896	Golgi to vacuole transport	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007267	cell-cell signaling	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008187	poly-pyrimidine tract binding	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008266	poly(U) RNA binding	IEP	HCCA
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	HCCA
BP	GO:0009396	folic acid-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009615	response to virus	IEP	HCCA
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
MF	GO:0009884	cytokinin receptor activity	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009942	longitudinal axis specification	IEP	HCCA
BP	GO:0009945	radial axis specification	IEP	HCCA
BP	GO:0009954	proximal/distal pattern formation	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010050	vegetative phase change	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010216	maintenance of DNA methylation	IEP	HCCA
BP	GO:0010267	production of ta-siRNAs involved in RNA interference	IEP	HCCA
BP	GO:0010271	regulation of chlorophyll catabolic process	IEP	HCCA
MF	GO:0010348	lithium:proton antiporter activity	IEP	HCCA
BP	GO:0010352	lithium ion export across the plasma membrane	IEP	HCCA
MF	GO:0010385	double-stranded methylated DNA binding	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	posttranscriptional regulation of gene expression	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010959	regulation of metal ion transport	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016160	amylase activity	IEP	HCCA
MF	GO:0016161	beta-amylase activity	IEP	HCCA
MF	GO:0016208	AMP binding	IEP	HCCA
BP	GO:0016246	RNA interference	IEP	HCCA
BP	GO:0016441	posttranscriptional gene silencing	IEP	HCCA
BP	GO:0016569	obsolete covalent chromatin modification	IEP	HCCA
BP	GO:0016573	histone acetylation	IEP	HCCA
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016929	SUMO-specific protease activity	IEP	HCCA
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0018394	peptidyl-lysine acetylation	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0022610	biological adhesion	IEP	HCCA
BP	GO:0023052	signaling	IEP	HCCA
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0030422	production of siRNA involved in RNA interference	IEP	HCCA
BP	GO:0030641	regulation of cellular pH	IEP	HCCA
BP	GO:0031047	gene silencing by RNA	IEP	HCCA
BP	GO:0031050	dsRNA processing	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031507	heterochromatin assembly	IEP	HCCA
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034756	regulation of iron ion transport	IEP	HCCA
BP	GO:0034757	negative regulation of iron ion transport	IEP	HCCA
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	HCCA
BP	GO:0035196	production of miRNAs involved in gene silencing by miRNA	IEP	HCCA
BP	GO:0040029	regulation of gene expression, epigenetic	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA
BP	GO:0042559	pteridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042780	tRNA 3'-end processing	IEP	HCCA
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043269	regulation of ion transport	IEP	HCCA
BP	GO:0043271	negative regulation of ion transport	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0043628	ncRNA 3'-end processing	IEP	HCCA
BP	GO:0043966	histone H3 acetylation	IEP	HCCA
BP	GO:0043971	histone H3-K18 acetylation	IEP	HCCA
BP	GO:0043972	histone H3-K23 acetylation	IEP	HCCA
BP	GO:0044030	regulation of DNA methylation	IEP	HCCA
BP	GO:0044154	histone H3-K14 acetylation	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045814	negative regulation of gene expression, epigenetic	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0051051	negative regulation of transport	IEP	HCCA
BP	GO:0051259	protein complex oligomerization	IEP	HCCA
BP	GO:0051260	protein homooligomerization	IEP	HCCA
BP	GO:0051453	regulation of intracellular pH	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0055067	monovalent inorganic cation homeostasis	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0070417	cellular response to cold	IEP	HCCA
BP	GO:0070828	heterochromatin organization	IEP	HCCA
BP	GO:0070839	metal ion export	IEP	HCCA
BP	GO:0070918	production of small RNA involved in gene silencing by RNA	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0080117	secondary growth	IEP	HCCA
BP	GO:0080171	lytic vacuole organization	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
BP	GO:0080190	lateral growth	IEP	HCCA
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090342	regulation of cell aging	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
BP	GO:0140115	export across plasma membrane	IEP	HCCA
MF	GO:0140299	small molecule sensor activity	IEP	HCCA
BP	GO:0140458	pre-transcriptional gene silencing by RNA	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901404	regulation of tetrapyrrole catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	694	826
IPR003959	ATPase_AAA_core	380	533

External Links

PLAZA 3.0 Dicots	AT1G03000

AT1G03000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation