- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : F-box family protein
Gene families : OG_01_0001079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001079_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G20795 | |
| Cluster | HCCA: Cluster_218 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G20240 | No alias | SWI-SNF-related chromatin binding protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20290 | No alias | SWI-SNF-related chromatin binding protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20360 | No alias | F-box family protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20690 | No alias | SWI-SNF-related chromatin binding protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G20735 | No alias | F-box and associated interaction domains-containing protein | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G57565 | No alias | SWI-SNF-related chromatin binding protein | 0.07 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT1G57580 | No alias | F-box family protein | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000003 | reproduction | IEP | HCCA |
| BP | GO:0000723 | telomere maintenance | IEP | HCCA |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
| MF | GO:0005253 | anion channel activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0007059 | chromosome segregation | IEP | HCCA |
| BP | GO:0007062 | sister chromatid cohesion | IEP | HCCA |
| BP | GO:0007129 | homologous chromosome pairing at meiosis | IEP | HCCA |
| BP | GO:0007131 | reciprocal meiotic recombination | IEP | HCCA |
| BP | GO:0007140 | male meiotic nuclear division | IEP | HCCA |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | HCCA |
| MF | GO:0009916 | alternative oxidase activity | IEP | HCCA |
| BP | GO:0010098 | suspensor development | IEP | HCCA |
| BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
| BP | GO:0010332 | response to gamma radiation | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| BP | GO:0032200 | telomere organization | IEP | HCCA |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | HCCA |
| BP | GO:0032504 | multicellular organism reproduction | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| BP | GO:0035825 | homologous recombination | IEP | HCCA |
| BP | GO:0042138 | meiotic DNA double-strand break formation | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | HCCA |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | HCCA |
| MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
| BP | GO:0048598 | embryonic morphogenesis | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0061982 | meiosis I cell cycle process | IEP | HCCA |
| BP | GO:0070192 | chromosome organization involved in meiotic cell cycle | IEP | HCCA |
| BP | GO:0080159 | zygote elongation | IEP | HCCA |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | HCCA |
| BP | GO:0098813 | nuclear chromosome segregation | IEP | HCCA |
| BP | GO:0140013 | meiotic nuclear division | IEP | HCCA |
| BP | GO:0140527 | reciprocal homologous recombination | IEP | HCCA |
| BP | GO:1903046 | meiotic cell cycle process | IEP | HCCA |
No InterPro domains available for this sequence
| PLAZA 3.0 Dicots | AT1G20795 |