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  5. AT5G04310

AT5G04310


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0011818 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G04310
Cluster HCCA: Cluster_19


Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0030570 pectate lyase activity ISS Interproscan
CC GO:0031225 anchored component of membrane TAS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009682 induced systemic resistance IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
MF GO:0010427 abscisic acid binding IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0019840 isoprenoid binding IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0046519 sphingoid metabolic process IEP HCCA
BP GO:0046520 sphingoid biosynthetic process IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002022 Pec_lyase 173 358
PLAZA 3.0 Dicots AT5G04310