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  5. AT5G04420

AT5G04420


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG_01_0001318 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G04420
Cluster HCCA: Zci_00004.1 detailsCluster_99

Target Alias Description ECC score Gene Family Method Actions
Cre02.g074650 No alias Acyl-CoA-binding domain-containing protein 4... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g16170.1 No alias Acyl-CoA-binding domain-containing protein 4... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_17400V3.1 No alias acyl-CoA binding protein 4 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_01382.2 No alias acyl-CoA-binding protein (ACBP4/5) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006869 lipid transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006828 manganese ion transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0008511 sodium:potassium:chloride symporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
MF GO:0009674 potassium:sodium symporter activity IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP HCCA
CC GO:0010005 cortical microtubule, transverse to long axis IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
MF GO:0015296 anion:cation symporter activity IEP HCCA
MF GO:0015370 solute:sodium symporter activity IEP HCCA
MF GO:0015373 anion:sodium symporter activity IEP HCCA
MF GO:0015377 cation:chloride symporter activity IEP HCCA
MF GO:0015378 sodium:chloride symporter activity IEP HCCA
MF GO:0015379 potassium:chloride symporter activity IEP HCCA
MF GO:0015410 ABC-type manganese transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0045053 protein retention in Golgi apparatus IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
CC GO:0055028 cortical microtubule IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901420 negative regulation of response to alcohol IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1905958 negative regulation of cellular response to alcohol IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
BP GO:2000037 regulation of stomatal complex patterning IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 34 75
PLAZA 3.0 Dicots AT5G04420