AT5G05720

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_01_0003613 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003613_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05720
Cluster	HCCA: Cluster_218

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT5G08695	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	HCCA
BP	GO:0006333	chromatin assembly or disassembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	4	70

External Links

PLAZA 3.0 Dicots	AT5G05720