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  5. AT1G21310

AT1G21310


Description : extensin 3


Gene families : OG_01_0017142 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21310
Cluster HCCA: Cluster_212


Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall IDA Interproscan
BP GO:0009735 response to cytokinin RCA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0043248 proteasome assembly RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006820 anion transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009561 megagametogenesis IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
MF GO:0009927 histidine phosphotransfer kinase activity IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
MF GO:0010283 pinoresinol reductase activity IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transport IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0034406 cell wall beta-glucan metabolic process IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR006706 Extensin_dom 92 144
IPR006706 Extensin_dom 204 248
IPR006706 Extensin_dom 148 200
PLAZA 3.0 Dicots AT1G21310