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  5. AT5G06300

AT5G06300


Description : Putative lysine decarboxylase family protein


Gene families : OG_01_0000372 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06300
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT5G26140 No alias Putative lysine decarboxylase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_19580V3.1 No alias Putative lysine decarboxylase family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006826 iron ion transport RCA Interproscan
BP GO:0008152 metabolic process ISS Interproscan
BP GO:0009733 response to auxin RCA Interproscan
BP GO:0009741 response to brassinosteroid RCA Interproscan
BP GO:0010106 cellular response to iron ion starvation RCA Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0015706 nitrate transport RCA Interproscan
MF GO:0016831 carboxy-lyase activity ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004351 glutamate decarboxylase activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005513 detection of calcium ion IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of ion transmembrane transport IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0040007 growth IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0043269 regulation of ion transport IEP HCCA
BP GO:0044070 regulation of anion transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050105 L-gulonolactone oxidase activity IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0120178 steroid hormone biosynthetic process IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
BP GO:1903959 regulation of anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR031100 LOG_fam 53 183
PLAZA 3.0 Dicots AT5G06300