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  5. AT5G09680

AT5G09680


Description : reduced lateral root formation


Gene families : OG_01_0008466 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008466_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G09680
Cluster HCCA: Cluster_69


Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0010311 lateral root formation IMP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000919 cell plate assembly IEP HCCA
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP HCCA
MF GO:0005201 extracellular matrix structural constituent IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006522 alanine metabolic process IEP HCCA
BP GO:0006524 alanine catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009078 pyruvate family amino acid metabolic process IEP HCCA
BP GO:0009080 pyruvate family amino acid catabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009163 nucleoside biosynthetic process IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009920 cell plate formation involved in plant-type cell wall biogenesis IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019481 L-alanine catabolic process, by transamination IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042455 ribonucleoside biosynthetic process IEP HCCA
BP GO:0042851 L-alanine metabolic process IEP HCCA
BP GO:0042853 L-alanine catabolic process IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0046108 uridine metabolic process IEP HCCA
BP GO:0046109 uridine biosynthetic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046132 pyrimidine ribonucleoside biosynthetic process IEP HCCA
BP GO:0046134 pyrimidine nucleoside biosynthetic process IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
MF GO:0047635 alanine-oxo-acid transaminase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001199 Cyt_B5-like_heme/steroid-bd 131 201
PLAZA 3.0 Dicots AT5G09680