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  5. AT5G10250

AT5G10250


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_01_0000052 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G10250
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G64330 No alias Phototropic-responsive NPH3 family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g03480.1 No alias BTB/POZ domain-containing protein At1g67900... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g03290.1 No alias BTB/POZ domain-containing protein At1g30440... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_19380V3.1 No alias Phototropic-responsive NPH3 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_4520V3.1 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_4380V3.1 No alias Phototropic-responsive NPH3 family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
BP GO:0010087 phloem or xylem histogenesis IMP Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010588 cotyledon vascular tissue pattern formation IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
BP GO:0080022 primary root development IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009299 mRNA transcription IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043425 bHLH transcription factor binding IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
MF GO:0140297 DNA-binding transcription factor binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 214 463
PLAZA 3.0 Dicots AT5G10250