1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G12240

AT5G12240


Description : unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0010293 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12240
Cluster HCCA: Cluster_137


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0000418 RNA polymerase IV complex IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0000930 gamma-tubulin complex IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004161 dimethylallyltranstransferase activity IEP HCCA
MF GO:0004337 geranyltranstransferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005665 RNA polymerase II, core complex IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005828 kinetochore microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007052 mitotic spindle organization IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
BP GO:0008154 actin polymerization or depolymerization IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009527 plastid outer membrane IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009853 photorespiration IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
BP GO:0030041 actin filament polymerization IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP HCCA
BP GO:0045338 farnesyl diphosphate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051192 prosthetic group binding IEP HCCA
BP GO:0051258 protein polymerization IEP HCCA
BP GO:0051418 microtubule nucleation by microtubule organizing center IEP HCCA
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0072686 mitotic spindle IEP HCCA
BP GO:0080129 proteasome core complex assembly IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G12240