AT5G12320

Description : ankyrin repeat family protein

Gene families : OG_01_0006673 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006673_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12320
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cre12.g484500	No alias	Ankyrin repeat domain-containing protein 2A...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
CC	GO:0000932	P-body	IEP	HCCA
MF	GO:0004527	exonuclease activity	IEP	HCCA
MF	GO:0004532	exoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
MF	GO:0008408	3'-5' exonuclease activity	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0016925	protein sumoylation	IEP	HCCA
MF	GO:0031386	protein tag	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0035770	ribonucleoprotein granule	IEP	HCCA
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	HCCA
BP	GO:0043433	negative regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

PLAZA 3.0 Dicots	AT5G12320