AT5G13930

Description : Chalcone and stilbene synthase family protein

Gene families : OG_01_0000235 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000235_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G13930
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
Mp4g14100.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g14120.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g14150.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g14180.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g14190.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g14200.1	No alias	chalcone synthase	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g18370.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g14890.1	No alias	chalcone synthase	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g14930.1	No alias	chalcone synthase	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g14960.1	No alias	chalcone synthase	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	RCA	Interproscan
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	IMP	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
CC	GO:0009705	plant-type vacuole membrane	IDA	Interproscan
BP	GO:0009714	chalcone metabolic process	None	Extended
BP	GO:0009715	chalcone biosynthetic process	IMP	Interproscan
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	IMP	Interproscan
BP	GO:0009813	flavonoid biosynthetic process	ISS	Interproscan
BP	GO:0009813	flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009914	hormone transport	None	Extended
BP	GO:0009926	auxin polar transport	IMP	Interproscan
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010224	response to UV-B	IMP	Interproscan
BP	GO:0010224	response to UV-B	RCA	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016210	naringenin-chalcone synthase activity	IMP	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	None	Extended
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	Interproscan
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042180	cellular ketone metabolic process	None	Extended
BP	GO:0042181	ketone biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004126	cytidine deaminase activity	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	HCCA
BP	GO:0006216	cytidine catabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009119	ribonucleoside metabolic process	IEP	HCCA
BP	GO:0009164	nucleoside catabolic process	IEP	HCCA
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	HCCA
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0009801	cinnamic acid ester metabolic process	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009972	cytidine deamination	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010253	UDP-rhamnose biosynthetic process	IEP	HCCA
MF	GO:0010280	UDP-L-rhamnose synthase activity	IEP	HCCA
BP	GO:0010315	auxin efflux	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
CC	GO:0031312	extrinsic component of organelle membrane	IEP	HCCA
BP	GO:0033478	UDP-rhamnose metabolic process	IEP	HCCA
BP	GO:0034656	nucleobase-containing small molecule catabolic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
CC	GO:0042406	extrinsic component of endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0042454	ribonucleoside catabolic process	IEP	HCCA
MF	GO:0045430	chalcone isomerase activity	IEP	HCCA
MF	GO:0045431	flavonol synthase activity	IEP	HCCA
MF	GO:0045486	naringenin 3-dioxygenase activity	IEP	HCCA
BP	GO:0046087	cytidine metabolic process	IEP	HCCA
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	HCCA
BP	GO:0046133	pyrimidine ribonucleoside catabolic process	IEP	HCCA
BP	GO:0046135	pyrimidine nucleoside catabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0047213	anthocyanidin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0050284	sinapate 1-glucosyltransferase activity	IEP	HCCA
MF	GO:0050377	UDP-glucose 4,6-dehydratase activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0051552	flavone metabolic process	IEP	HCCA
BP	GO:0051553	flavone biosynthetic process	IEP	HCCA
BP	GO:0051554	flavonol metabolic process	IEP	HCCA
BP	GO:0051555	flavonol biosynthetic process	IEP	HCCA
MF	GO:0052636	arabinosyltransferase activity	IEP	HCCA
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080059	flavonol 3-O-arabinosyltransferase activity	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:1900384	regulation of flavonol biosynthetic process	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA
BP	GO:1901658	glycosyl compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001099	Chalcone/stilbene_synt_N	10	233
IPR012328	Chalcone/stilbene_synt_C	244	394

External Links

PLAZA 3.0 Dicots	AT5G13930

AT5G13930

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation