AT5G15490

Description : UDP-glucose 6-dehydrogenase family protein

Gene families : OG_01_0000625 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G15490
Cluster	HCCA: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c23_18200V3.1	No alias	UDP-glucose 6-dehydrogenase family protein	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IDA	Interproscan
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	IGI	Interproscan
MF	GO:0003979	UDP-glucose 6-dehydrogenase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IGI	Interproscan
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0006065	UDP-glucuronate biosynthetic process	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009225	nucleotide-sugar metabolic process	None	Extended
BP	GO:0009226	nucleotide-sugar biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0042732	D-xylose metabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0045488	pectin metabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046398	UDP-glucuronate metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0052546	cell wall pectin metabolic process	IGI	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000254	C-4 methylsterol oxidase activity	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003878	ATP citrate synthase activity	IEP	HCCA
MF	GO:0004382	guanosine-diphosphatase activity	IEP	HCCA
MF	GO:0004614	phosphoglucomutase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005740	mitochondrial envelope	IEP	HCCA
BP	GO:0006004	fucose metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
CC	GO:0009346	ATP-independent citrate lyase complex	IEP	HCCA
BP	GO:0009590	detection of gravity	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
MF	GO:0009916	alternative oxidase activity	IEP	HCCA
BP	GO:0009969	xyloglucan biosynthetic process	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010230	alternative respiration	IEP	HCCA
BP	GO:0010256	endomembrane system organization	IEP	HCCA
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010623	programmed cell death involved in cell development	IEP	HCCA
BP	GO:0012501	programmed cell death	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	HCCA
MF	GO:0017040	N-acylsphingosine amidohydrolase activity	IEP	HCCA
MF	GO:0017110	nucleoside-diphosphatase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019255	glucose 1-phosphate metabolic process	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019320	hexose catabolic process	IEP	HCCA
BP	GO:0019388	galactose catabolic process	IEP	HCCA
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030036	actin cytoskeleton organization	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
CC	GO:0030173	integral component of Golgi membrane	IEP	HCCA
CC	GO:0031228	intrinsic component of Golgi membrane	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	HCCA
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
BP	GO:0042353	fucose biosynthetic process	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0045134	uridine-diphosphatase activity	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046365	monosaccharide catabolic process	IEP	HCCA
MF	GO:0046912	acyltransferase, acyl groups converted into alkyl on transfer	IEP	HCCA
BP	GO:0050826	response to freezing	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0071258	cellular response to gravity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080064	4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1900030	regulation of pectin biosynthetic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014026	UDP-Glc/GDP-Man_DH_dimer	210	304
IPR001732	UDP-Glc/GDP-Man_DH_N	3	186
IPR014027	UDP-Glc/GDP-Man_DH_C	328	451

External Links

PLAZA 3.0 Dicots	AT5G15490

AT5G15490

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation