AT5G17980

Description : C2 calcium/lipid-binding plant phosphoribosyltransferase family protein

Gene families : OG_01_0000211 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G17980
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
Mp6g00440.1	No alias	no description available(sp\|q60ew9\|ftip7_orysj : 926.0)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_9250V3.1	No alias	C2 calcium/lipid-binding plant phosphoribosyltransferase...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_9260V3.1	No alias	C2 calcium/lipid-binding plant phosphoribosyltransferase...	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c27_520V3.1	No alias	C2 calcium/lipid-binding plant phosphoribosyltransferase...	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0001678	cellular glucose homeostasis	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0003867	4-aminobutyrate transaminase activity	IEP	HCCA
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	HCCA
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
BP	GO:0006020	inositol metabolic process	IEP	HCCA
BP	GO:0006105	succinate metabolic process	IEP	HCCA
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	HCCA
BP	GO:0006536	glutamate metabolic process	IEP	HCCA
BP	GO:0006538	glutamate catabolic process	IEP	HCCA
BP	GO:0006540	glutamate decarboxylation to succinate	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
MF	GO:0008172	S-methyltransferase activity	IEP	HCCA
BP	GO:0008300	isoprenoid catabolic process	IEP	HCCA
MF	GO:0008898	S-adenosylmethionine-homocysteine S-methyltransferase activity	IEP	HCCA
BP	GO:0009065	glutamine family amino acid catabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009448	gamma-aminobutyric acid metabolic process	IEP	HCCA
BP	GO:0009450	gamma-aminobutyric acid catabolic process	IEP	HCCA
BP	GO:0009645	response to low light intensity stimulus	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0009865	pollen tube adhesion	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010244	response to low fluence blue light stimulus by blue low-fluence system	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
CC	GO:0015630	microtubule cytoskeleton	IEP	HCCA
BP	GO:0015774	polysaccharide transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016103	diterpenoid catabolic process	IEP	HCCA
BP	GO:0016115	terpenoid catabolic process	IEP	HCCA
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019482	beta-alanine metabolic process	IEP	HCCA
BP	GO:0019484	beta-alanine catabolic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0022610	biological adhesion	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031445	regulation of heterochromatin assembly	IEP	HCCA
BP	GO:0031453	positive regulation of heterochromatin assembly	IEP	HCCA
BP	GO:0033500	carbohydrate homeostasis	IEP	HCCA
MF	GO:0034387	4-aminobutyrate:pyruvate transaminase activity	IEP	HCCA
BP	GO:0042593	glucose homeostasis	IEP	HCCA
BP	GO:0042754	negative regulation of circadian rhythm	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043649	dicarboxylic acid catabolic process	IEP	HCCA
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0045176	apical protein localization	IEP	HCCA
BP	GO:0045487	gibberellin catabolic process	IEP	HCCA
MF	GO:0045543	gibberellin 2-beta-dioxygenase activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
BP	GO:0051865	protein autoubiquitination	IEP	HCCA
BP	GO:0052033	obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	IEP	HCCA
MF	GO:0052634	C-19 gibberellin 2-beta-dioxygenase activity	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0071322	cellular response to carbohydrate stimulus	IEP	HCCA
BP	GO:0071326	cellular response to monosaccharide stimulus	IEP	HCCA
BP	GO:0071331	cellular response to hexose stimulus	IEP	HCCA
BP	GO:0071333	cellular response to glucose stimulus	IEP	HCCA
MF	GO:0080046	quercetin 4'-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090308	regulation of DNA methylation-dependent heterochromatin assembly	IEP	HCCA
BP	GO:0090309	positive regulation of DNA methylation-dependent heterochromatin assembly	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098609	cell-cell adhesion	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:0120261	regulation of heterochromatin organization	IEP	HCCA
BP	GO:0120263	positive regulation of heterochromatin organization	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1902275	regulation of chromatin organization	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905269	positive regulation of chromatin organization	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:2001252	positive regulation of chromosome organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013583	PRibTrfase_C	893	1049
IPR000008	C2_dom	324	418
IPR000008	C2_dom	634	747
IPR000008	C2_dom	6	108
IPR000008	C2_dom	477	575

External Links

PLAZA 3.0 Dicots	AT5G17980

AT5G17980

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation