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  5. AT1G22660

AT1G22660


Description : Polynucleotide adenylyltransferase family protein


Gene families : OG_01_0006552 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22660
Cluster HCCA: Cluster_152


Type GO Term Name Evidence Source
MF GO:0004810 tRNA adenylyltransferase activity ISS Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008033 tRNA processing ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009630 gravitropism RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000003 reproduction IEP HCCA
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000281 mitotic cytokinesis IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP HCCA
BP GO:0000712 resolution of meiotic recombination intermediates IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003949 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-dependent DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin assembly IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006464 cellular protein modification process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0007143 female meiotic nuclear division IEP HCCA
MF GO:0008142 oxysterol binding IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009560 embryo sac egg cell differentiation IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010030 positive regulation of seed germination IEP HCCA
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP HCCA
BP GO:0010070 zygote asymmetric cell division IEP HCCA
BP GO:0010074 maintenance of meristem identity IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
BP GO:0010100 negative regulation of photomorphogenesis IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010267 production of ta-siRNAs involved in RNA interference IEP HCCA
BP GO:0010305 leaf vascular tissue pattern formation IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010338 leaf formation IEP HCCA
BP GO:0010358 leaf shaping IEP HCCA
BP GO:0010425 DNA methylation on cytosine within a CNG sequence IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 histone phosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017069 snRNA binding IEP HCCA
MF GO:0017111 nucleoside-triphosphatase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030422 production of siRNA involved in RNA interference IEP HCCA
MF GO:0030619 U1 snRNA binding IEP HCCA
MF GO:0030620 U2 snRNA binding IEP HCCA
BP GO:0031047 gene silencing by RNA IEP HCCA
BP GO:0031048 heterochromatin assembly by small RNA IEP HCCA
BP GO:0031050 dsRNA processing IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0031060 regulation of histone methylation IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031125 rRNA 3'-end processing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0031507 heterochromatin assembly IEP HCCA
BP GO:0031935 obsolete regulation of chromatin silencing IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
MF GO:0032934 sterol binding IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 regulation of gene expression, epigenetic IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043628 ncRNA 3'-end processing IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044267 cellular protein metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045893 positive regulation of transcription, DNA-templated IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051570 regulation of histone H3-K9 methylation IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
MF GO:0070628 proteasome binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 production of small RNA involved in gene silencing by RNA IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR002646 PolA_pol_head_dom 110 247
PLAZA 3.0 Dicots AT1G22660