Coexpression cluster: Cluster_152 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0018022 peptidyl-lysine methylation 20.24% (17/84) 4.59 0.0 0.0
GO:0006259 DNA metabolic process 26.19% (22/84) 3.7 0.0 0.0
GO:0034968 histone lysine methylation 20.24% (17/84) 4.6 0.0 0.0
GO:0006479 protein methylation 20.24% (17/84) 4.28 0.0 0.0
GO:0008213 protein alkylation 20.24% (17/84) 4.28 0.0 0.0
GO:0016571 histone methylation 20.24% (17/84) 4.3 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 42.86% (36/84) 2.3 0.0 0.0
GO:0051567 histone H3-K9 methylation 16.67% (14/84) 4.69 0.0 0.0
GO:0061647 histone H3-K9 modification 16.67% (14/84) 4.69 0.0 0.0
GO:0018205 peptidyl-lysine modification 20.24% (17/84) 4.04 0.0 0.0
GO:0016570 histone modification 20.24% (17/84) 4.0 0.0 0.0
GO:0090304 nucleic acid metabolic process 36.9% (31/84) 2.47 0.0 0.0
GO:0018193 peptidyl-amino acid modification 20.24% (17/84) 3.8 0.0 0.0
GO:0046483 heterocycle metabolic process 42.86% (36/84) 2.08 0.0 0.0
GO:0032259 methylation 21.43% (18/84) 3.55 0.0 0.0
GO:0043414 macromolecule methylation 21.43% (18/84) 3.55 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 42.86% (36/84) 2.0 0.0 0.0
GO:0031048 heterochromatin assembly by small RNA 13.1% (11/84) 4.98 0.0 0.0
GO:0016458 obsolete gene silencing 10.71% (9/84) 5.67 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 42.86% (36/84) 1.93 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 44.05% (37/84) 1.82 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 42.86% (36/84) 1.86 0.0 0.0
GO:0010629 negative regulation of gene expression 17.86% (15/84) 3.65 0.0 0.0
GO:0043170 macromolecule metabolic process 48.81% (41/84) 1.57 0.0 0.0
GO:0006346 DNA methylation-dependent heterochromatin assembly 11.9% (10/84) 4.71 0.0 0.0
GO:0006304 DNA modification 13.1% (11/84) 4.38 0.0 0.0
GO:0070828 heterochromatin organization 13.1% (11/84) 4.38 0.0 0.0
GO:0044728 DNA methylation or demethylation 13.1% (11/84) 4.39 0.0 0.0
GO:0031507 heterochromatin assembly 13.1% (11/84) 4.39 0.0 0.0
GO:0045814 negative regulation of gene expression, epigenetic 13.1% (11/84) 4.35 0.0 0.0
GO:0022402 cell cycle process 19.05% (16/84) 3.28 0.0 0.0
GO:0006325 chromatin organization 14.29% (12/84) 3.93 0.0 0.0
GO:0006260 DNA replication 14.29% (12/84) 3.93 0.0 0.0
GO:0040029 regulation of gene expression, epigenetic 13.1% (11/84) 4.17 0.0 0.0
GO:0010605 negative regulation of macromolecule metabolic process 19.05% (16/84) 3.1 0.0 0.0
GO:0009892 negative regulation of metabolic process 19.05% (16/84) 3.04 0.0 0.0
GO:0006305 DNA alkylation 11.9% (10/84) 4.27 0.0 0.0
GO:0006306 DNA methylation 11.9% (10/84) 4.27 0.0 0.0
GO:0006807 nitrogen compound metabolic process 48.81% (41/84) 1.4 0.0 0.0
GO:0006310 DNA recombination 11.9% (10/84) 3.8 0.0 0.0
GO:0043412 macromolecule modification 27.38% (23/84) 2.04 0.0 0.0
GO:0036211 protein modification process 23.81% (20/84) 2.14 0.0 0.0
GO:0006464 cellular protein modification process 23.81% (20/84) 2.14 0.0 0.0
GO:0005634 nucleus 63.1% (53/84) 0.91 0.0 1e-06
GO:0044237 cellular metabolic process 53.57% (45/84) 1.08 0.0 1e-06
GO:1903046 meiotic cell cycle process 10.71% (9/84) 3.61 0.0 1e-06
GO:0071704 organic substance metabolic process 53.57% (45/84) 1.02 0.0 2e-06
GO:0022412 cellular process involved in reproduction in multicellular organism 9.52% (8/84) 3.82 0.0 2e-06
GO:0000910 cytokinesis 9.52% (8/84) 3.79 0.0 2e-06
GO:0009909 regulation of flower development 11.9% (10/84) 3.21 0.0 2e-06
GO:0022414 reproductive process 27.38% (23/84) 1.76 0.0 2e-06
GO:0044238 primary metabolic process 48.81% (41/84) 1.09 0.0 3e-06
GO:0048831 regulation of shoot system development 11.9% (10/84) 3.15 0.0 3e-06
GO:0009560 embryo sac egg cell differentiation 8.33% (7/84) 4.06 0.0 3e-06
GO:0006261 DNA-dependent DNA replication 9.52% (8/84) 3.68 0.0 3e-06
GO:0048449 floral organ formation 8.33% (7/84) 4.04 0.0 4e-06
GO:0048519 negative regulation of biological process 19.05% (16/84) 2.17 0.0 6e-06
GO:0051276 chromosome organization 9.52% (8/84) 3.54 0.0 7e-06
GO:0008283 cell population proliferation 8.33% (7/84) 3.84 1e-06 9e-06
GO:2000241 regulation of reproductive process 11.9% (10/84) 2.94 1e-06 1e-05
GO:0044267 cellular protein metabolic process 23.81% (20/84) 1.8 1e-06 1e-05
GO:0008152 metabolic process 53.57% (45/84) 0.91 1e-06 1.7e-05
GO:0006270 DNA replication initiation 5.95% (5/84) 4.66 2e-06 2.2e-05
GO:0000911 cytokinesis by cell plate formation 8.33% (7/84) 3.62 2e-06 2.2e-05
GO:0003777 microtubule motor activity 5.95% (5/84) 4.64 2e-06 2.3e-05
GO:0048580 regulation of post-embryonic development 11.9% (10/84) 2.79 2e-06 2.3e-05
GO:0009987 cellular process 61.9% (52/84) 0.76 2e-06 2.4e-05
GO:0060255 regulation of macromolecule metabolic process 26.19% (22/84) 1.59 2e-06 2.4e-05
GO:2000026 regulation of multicellular organismal development 11.9% (10/84) 2.77 2e-06 2.5e-05
GO:0140640 catalytic activity, acting on a nucleic acid 10.71% (9/84) 2.98 2e-06 2.6e-05
GO:1905393 plant organ formation 8.33% (7/84) 3.57 2e-06 2.6e-05
GO:0006974 cellular response to DNA damage stimulus 9.52% (8/84) 3.16 3e-06 3.8e-05
GO:0006275 regulation of DNA replication 7.14% (6/84) 3.88 3e-06 4e-05
GO:0140527 reciprocal homologous recombination 7.14% (6/84) 3.86 4e-06 4.2e-05
GO:0007131 reciprocal meiotic recombination 7.14% (6/84) 3.86 4e-06 4.2e-05
GO:0051239 regulation of multicellular organismal process 11.9% (10/84) 2.67 4e-06 4.4e-05
GO:0035825 homologous recombination 7.14% (6/84) 3.84 4e-06 4.5e-05
GO:0007129 homologous chromosome pairing at meiosis 5.95% (5/84) 4.36 5e-06 5e-05
GO:0070192 chromosome organization involved in meiotic cell cycle 5.95% (5/84) 4.31 6e-06 5.9e-05
GO:0003774 cytoskeletal motor activity 5.95% (5/84) 4.29 6e-06 6.1e-05
GO:0034645 cellular macromolecule biosynthetic process 17.86% (15/84) 1.95 6e-06 6.7e-05
GO:0034971 histone H3-R17 methylation 2.38% (2/84) 8.36 9e-06 9.1e-05
GO:0034970 histone H3-R2 methylation 2.38% (2/84) 8.36 9e-06 9.1e-05
GO:0034972 histone H3-R26 methylation 2.38% (2/84) 8.36 9e-06 9.1e-05
GO:0031047 gene silencing by RNA 7.14% (6/84) 3.63 1e-05 9.4e-05
GO:0019222 regulation of metabolic process 26.19% (22/84) 1.41 1.5e-05 0.000147
GO:0005488 binding 41.67% (35/84) 0.98 1.6e-05 0.000155
GO:0010267 production of ta-siRNAs involved in RNA interference 5.95% (5/84) 3.89 2.3e-05 0.000215
GO:0140657 ATP-dependent activity 9.52% (8/84) 2.77 2.3e-05 0.000217
GO:0019538 protein metabolic process 25.0% (21/84) 1.41 2.5e-05 0.000229
GO:0035241 protein-arginine omega-N monomethyltransferase activity 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0035279 mRNA cleavage involved in gene silencing by miRNA 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0008469 histone-arginine N-methyltransferase activity 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0035246 peptidyl-arginine N-methylation 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0035247 peptidyl-arginine omega-N-methylation 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0019919 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine 2.38% (2/84) 7.78 2.7e-05 0.000234
GO:0009059 macromolecule biosynthetic process 17.86% (15/84) 1.76 3e-05 0.00025
GO:0051726 regulation of cell cycle 8.33% (7/84) 2.99 3e-05 0.000253
GO:0003006 developmental process involved in reproduction 20.24% (17/84) 1.59 3.8e-05 0.000316
GO:0005515 protein binding 21.43% (18/84) 1.52 3.8e-05 0.000318
GO:0048646 anatomical structure formation involved in morphogenesis 8.33% (7/84) 2.92 4e-05 0.000324
GO:0035196 production of miRNAs involved in gene silencing by miRNA 5.95% (5/84) 3.68 4.5e-05 0.000365
GO:0034969 histone arginine methylation 2.38% (2/84) 7.36 5.4e-05 0.000431
GO:0010589 leaf proximal/distal pattern formation 2.38% (2/84) 7.36 5.4e-05 0.000431
GO:0008168 methyltransferase activity 5.95% (5/84) 3.6 6e-05 0.000474
GO:0050793 regulation of developmental process 13.1% (11/84) 2.05 6.6e-05 0.000509
GO:0010305 leaf vascular tissue pattern formation 3.57% (3/84) 5.25 6.7e-05 0.000514
GO:0048453 sepal formation 4.76% (4/84) 4.19 7e-05 0.000517
GO:0048451 petal formation 4.76% (4/84) 4.19 7e-05 0.000517
GO:0016070 RNA metabolic process 16.67% (14/84) 1.74 6.9e-05 0.000523
GO:0030422 production of siRNA involved in RNA interference 5.95% (5/84) 3.56 6.9e-05 0.000524
GO:0070918 production of small RNA involved in gene silencing by RNA 5.95% (5/84) 3.52 7.7e-05 0.000559
GO:0031050 dsRNA processing 5.95% (5/84) 3.52 7.7e-05 0.000559
GO:0051052 regulation of DNA metabolic process 4.76% (4/84) 4.13 8.2e-05 0.000591
GO:0010468 regulation of gene expression 21.43% (18/84) 1.44 8.4e-05 0.000596
GO:0016043 cellular component organization 22.62% (19/84) 1.38 8.4e-05 0.000599
GO:0018195 peptidyl-arginine modification 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0045003 double-strand break repair via synthesis-dependent strand annealing 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0016274 protein-arginine N-methyltransferase activity 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0016273 arginine N-methyltransferase activity 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0006379 mRNA cleavage 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0018216 peptidyl-arginine methylation 2.38% (2/84) 7.04 9.1e-05 0.000613
GO:0051607 defense response to virus 5.95% (5/84) 3.45 9.9e-05 0.00066
GO:0140546 defense response to symbiont 5.95% (5/84) 3.45 9.9e-05 0.00066
GO:0016741 transferase activity, transferring one-carbon groups 5.95% (5/84) 3.44 0.000102 0.000675
GO:0006281 DNA repair 7.14% (6/84) 2.99 0.000113 0.000743
GO:0006996 organelle organization 15.48% (13/84) 1.74 0.000123 0.000803
GO:1901363 heterocyclic compound binding 25.0% (21/84) 1.24 0.000132 0.000849
GO:0097159 organic cyclic compound binding 25.0% (21/84) 1.23 0.000144 0.000923
GO:0050789 regulation of biological process 33.33% (28/84) 0.99 0.000155 0.000984
GO:0033043 regulation of organelle organization 5.95% (5/84) 3.28 0.000173 0.001089
GO:1903047 mitotic cell cycle process 3.57% (3/84) 4.74 0.000195 0.001221
GO:0032502 developmental process 27.38% (23/84) 1.12 0.000201 0.001251
GO:0009615 response to virus 5.95% (5/84) 3.19 0.000231 0.001425
GO:0010051 xylem and phloem pattern formation 4.76% (4/84) 3.72 0.000249 0.001523
GO:0071840 cellular component organization or biogenesis 22.62% (19/84) 1.26 0.000259 0.001577
GO:0048869 cellular developmental process 10.71% (9/84) 2.08 0.000284 0.001712
GO:0051225 spindle assembly 3.57% (3/84) 4.42 0.000373 0.002238
GO:0043229 intracellular organelle 78.57% (66/84) 0.37 0.000391 0.002325
GO:0043226 organelle 78.57% (66/84) 0.37 0.000396 0.002342
GO:0140694 non-membrane-bounded organelle assembly 3.57% (3/84) 4.36 0.000424 0.002468
GO:0007051 spindle organization 3.57% (3/84) 4.36 0.000424 0.002468
GO:0070925 organelle assembly 3.57% (3/84) 4.33 0.00045 0.002605
GO:0034654 nucleobase-containing compound biosynthetic process 9.52% (8/84) 2.12 0.000513 0.002949
GO:0043247 telomere maintenance in response to DNA damage 3.57% (3/84) 4.25 0.000537 0.003062
GO:0003676 nucleic acid binding 19.05% (16/84) 1.31 0.000575 0.003261
GO:0006396 RNA processing 10.71% (9/84) 1.92 0.000607 0.003373
GO:0032204 regulation of telomere maintenance 3.57% (3/84) 4.19 0.0006 0.003376
GO:0043231 intracellular membrane-bounded organelle 77.38% (65/84) 0.37 0.000606 0.003388
GO:0043227 membrane-bounded organelle 77.38% (65/84) 0.36 0.000614 0.00339
GO:0033044 regulation of chromosome organization 4.76% (4/84) 3.36 0.000635 0.003435
GO:0007059 chromosome segregation 4.76% (4/84) 3.36 0.000635 0.003435
GO:0110165 cellular anatomical entity 96.43% (81/84) 0.19 0.000627 0.003437
GO:0006312 mitotic recombination 3.57% (3/84) 4.12 0.000703 0.003779
GO:0000226 microtubule cytoskeleton organization 5.95% (5/84) 2.78 0.000835 0.004461
GO:0016572 histone phosphorylation 3.57% (3/84) 3.99 0.000898 0.004711
GO:0032200 telomere organization 3.57% (3/84) 3.99 0.000898 0.004711
GO:0000723 telomere maintenance 3.57% (3/84) 3.99 0.000898 0.004711
GO:0016779 nucleotidyltransferase activity 4.76% (4/84) 3.21 0.000935 0.004873
GO:0000280 nuclear division 3.57% (3/84) 3.97 0.000941 0.004875
GO:0065007 biological regulation 33.33% (28/84) 0.84 0.000951 0.004896
GO:0010564 regulation of cell cycle process 4.76% (4/84) 3.2 0.00096 0.00491
GO:1902749 regulation of cell cycle G2/M phase transition 3.57% (3/84) 3.95 0.000985 0.00498
GO:0010389 regulation of G2/M transition of mitotic cell cycle 3.57% (3/84) 3.95 0.000985 0.00498
GO:0051169 nuclear transport 4.76% (4/84) 3.15 0.00109 0.005318
GO:0006913 nucleocytoplasmic transport 4.76% (4/84) 3.15 0.00109 0.005318
GO:0042054 histone methyltransferase activity 2.38% (2/84) 5.36 0.001064 0.005346
GO:0000724 double-strand break repair via homologous recombination 3.57% (3/84) 3.9 0.001078 0.005349
GO:0000725 recombinational repair 3.57% (3/84) 3.9 0.001078 0.005349
GO:0030154 cell differentiation 8.33% (7/84) 2.14 0.001085 0.005355
GO:0007017 microtubule-based process 5.95% (5/84) 2.67 0.001172 0.005683
GO:0016441 posttranscriptional gene silencing 4.76% (4/84) 3.1 0.001263 0.006089
GO:1901990 regulation of mitotic cell cycle phase transition 3.57% (3/84) 3.82 0.001278 0.006126
GO:1901564 organonitrogen compound metabolic process 27.38% (23/84) 0.93 0.001333 0.006355
GO:1901987 regulation of cell cycle phase transition 3.57% (3/84) 3.76 0.001442 0.006837
GO:0051128 regulation of cellular component organization 5.95% (5/84) 2.59 0.001478 0.006968
GO:0016569 obsolete covalent chromatin modification 2.38% (2/84) 5.12 0.001507 0.007066
GO:0010332 response to gamma radiation 3.57% (3/84) 3.72 0.001559 0.007267
GO:0009954 proximal/distal pattern formation 2.38% (2/84) 5.04 0.001672 0.007749
GO:0090501 RNA phosphodiester bond hydrolysis 2.38% (2/84) 4.9 0.002024 0.009281
GO:0009886 post-embryonic animal morphogenesis 2.38% (2/84) 4.9 0.002024 0.009281
GO:0010228 vegetative to reproductive phase transition of meristem 5.95% (5/84) 2.47 0.002167 0.009879
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.57% (3/84) 3.5 0.002384 0.010813
GO:0017076 purine nucleotide binding 8.33% (7/84) 1.92 0.002567 0.011457
GO:0032555 purine ribonucleotide binding 8.33% (7/84) 1.92 0.002544 0.011475
GO:0003002 regionalization 4.76% (4/84) 2.82 0.002563 0.011501
GO:0008170 N-methyltransferase activity 2.38% (2/84) 4.72 0.002614 0.011602
GO:0032553 ribonucleotide binding 8.33% (7/84) 1.91 0.002686 0.011862
GO:0008276 protein methyltransferase activity 2.38% (2/84) 4.66 0.002826 0.012413
GO:0010212 response to ionizing radiation 3.57% (3/84) 3.41 0.002881 0.01259
GO:0048285 organelle fission 3.57% (3/84) 3.38 0.00306 0.012646
GO:0009933 meristem structural organization 3.57% (3/84) 3.38 0.00306 0.012646
GO:0030620 U2 snRNA binding 1.19% (1/84) 8.36 0.003037 0.012679
GO:0031054 pre-miRNA processing 1.19% (1/84) 8.36 0.003037 0.012679
GO:1990817 RNA adenylyltransferase activity 1.19% (1/84) 8.36 0.003037 0.012679
GO:0004810 tRNA adenylyltransferase activity 1.19% (1/84) 8.36 0.003037 0.012679
GO:0017069 snRNA binding 1.19% (1/84) 8.36 0.003037 0.012679
GO:0030619 U1 snRNA binding 1.19% (1/84) 8.36 0.003037 0.012679
GO:0010425 DNA methylation on cytosine within a CNG sequence 1.19% (1/84) 8.36 0.003037 0.012679
GO:0004835 tubulin-tyrosine ligase activity 1.19% (1/84) 8.36 0.003037 0.012679
GO:0097367 carbohydrate derivative binding 8.33% (7/84) 1.88 0.002937 0.012768
GO:0019200 carbohydrate kinase activity 2.38% (2/84) 4.56 0.003274 0.013464
GO:0048532 anatomical structure arrangement 3.57% (3/84) 3.29 0.003636 0.014809
GO:0009616 RNAi-mediated antiviral immune response 3.57% (3/84) 3.29 0.003636 0.014809
GO:0007346 regulation of mitotic cell cycle 3.57% (3/84) 3.28 0.003738 0.015152
GO:0009887 animal organ morphogenesis 3.57% (3/84) 3.26 0.003842 0.015497
GO:0006302 double-strand break repair 3.57% (3/84) 3.25 0.003948 0.015847
GO:0007267 cell-cell signaling 3.57% (3/84) 3.23 0.004055 0.0162
GO:0023052 signaling 3.57% (3/84) 3.22 0.004164 0.016557
GO:0140097 catalytic activity, acting on DNA 3.57% (3/84) 3.18 0.004502 0.017816
GO:0003723 RNA binding 7.14% (6/84) 1.94 0.004796 0.01889
GO:0010608 posttranscriptional regulation of gene expression 4.76% (4/84) 2.54 0.005109 0.020032
GO:0007010 cytoskeleton organization 5.95% (5/84) 2.17 0.005135 0.020037
GO:0140098 catalytic activity, acting on RNA 4.76% (4/84) 2.53 0.005189 0.020154
GO:0044839 cell cycle G2/M phase transition 1.19% (1/84) 7.36 0.006066 0.022518
GO:0010069 zygote asymmetric cytokinesis in embryo sac 1.19% (1/84) 7.36 0.006066 0.022518
GO:0008574 plus-end-directed microtubule motor activity 1.19% (1/84) 7.36 0.006066 0.022518
GO:0000281 mitotic cytokinesis 1.19% (1/84) 7.36 0.006066 0.022518
GO:0042276 error-prone translesion synthesis 1.19% (1/84) 7.36 0.006066 0.022518
GO:0000404 heteroduplex DNA loop binding 1.19% (1/84) 7.36 0.006066 0.022518
GO:0000086 G2/M transition of mitotic cell cycle 1.19% (1/84) 7.36 0.006066 0.022518
GO:0005815 microtubule organizing center 1.19% (1/84) 7.36 0.006066 0.022518
GO:0090305 nucleic acid phosphodiester bond hydrolysis 3.57% (3/84) 3.04 0.00588 0.022735
GO:0009855 determination of bilateral symmetry 3.57% (3/84) 3.02 0.006155 0.022749
GO:0009799 specification of symmetry 3.57% (3/84) 3.01 0.006295 0.023165
GO:0006955 immune response 4.76% (4/84) 2.47 0.006029 0.023202
GO:0009888 tissue development 4.76% (4/84) 2.44 0.006481 0.023744
GO:0009220 pyrimidine ribonucleotide biosynthetic process 3.57% (3/84) 2.89 0.007803 0.02834
GO:0009218 pyrimidine ribonucleotide metabolic process 3.57% (3/84) 2.89 0.007803 0.02834
GO:0044249 cellular biosynthetic process 22.62% (19/84) 0.84 0.00799 0.028648
GO:0006220 pyrimidine nucleotide metabolic process 3.57% (3/84) 2.88 0.007964 0.028678
GO:0006221 pyrimidine nucleotide biosynthetic process 3.57% (3/84) 2.88 0.007964 0.028678
GO:0046982 protein heterodimerization activity 2.38% (2/84) 3.87 0.008292 0.029606
GO:0042991 obsolete transcription factor import into nucleus 2.38% (2/84) 3.84 0.008652 0.03076
GO:0005669 transcription factor TFIID complex 1.19% (1/84) 6.78 0.009085 0.031111
GO:0080111 DNA demethylation 1.19% (1/84) 6.78 0.009085 0.031111
GO:0004652 polynucleotide adenylyltransferase activity 1.19% (1/84) 6.78 0.009085 0.031111
GO:0010445 nuclear dicing body 1.19% (1/84) 6.78 0.009085 0.031111
GO:0019985 translesion synthesis 1.19% (1/84) 6.78 0.009085 0.031111
GO:0010070 zygote asymmetric cell division 1.19% (1/84) 6.78 0.009085 0.031111
GO:0080175 phragmoplast microtubule organization 1.19% (1/84) 6.78 0.009085 0.031111
GO:0035510 DNA dealkylation 1.19% (1/84) 6.78 0.009085 0.031111
GO:0072528 pyrimidine-containing compound biosynthetic process 3.57% (3/84) 2.82 0.008974 0.031769
GO:0035639 purine ribonucleoside triphosphate binding 7.14% (6/84) 1.73 0.0097 0.033081
GO:0009524 phragmoplast 2.38% (2/84) 3.75 0.009773 0.033198
GO:0008150 biological_process 85.71% (72/84) 0.2 0.009843 0.033299
GO:0018130 heterocycle biosynthetic process 9.52% (8/84) 1.42 0.010167 0.034121
GO:0005635 nuclear envelope 2.38% (2/84) 3.72 0.010161 0.034237
GO:0009165 nucleotide biosynthetic process 4.76% (4/84) 2.23 0.010537 0.035223
GO:1901293 nucleoside phosphate biosynthetic process 4.76% (4/84) 2.23 0.010665 0.035509
GO:0048481 plant ovule development 3.57% (3/84) 2.71 0.011013 0.036522
GO:0072527 pyrimidine-containing compound metabolic process 3.57% (3/84) 2.69 0.01141 0.037541
GO:0042802 identical protein binding 3.57% (3/84) 2.69 0.01141 0.037541
GO:0000731 DNA synthesis involved in DNA repair 1.19% (1/84) 6.36 0.012095 0.039181
GO:0010338 leaf formation 1.19% (1/84) 6.36 0.012095 0.039181
GO:0061640 cytoskeleton-dependent cytokinesis 1.19% (1/84) 6.36 0.012095 0.039181
GO:0005737 cytoplasm 21.43% (18/84) 0.81 0.012028 0.039419
GO:0032559 adenyl ribonucleotide binding 5.95% (5/84) 1.86 0.012373 0.039773
GO:0030554 adenyl nucleotide binding 5.95% (5/84) 1.86 0.012373 0.039773
GO:0010074 maintenance of meristem identity 2.38% (2/84) 3.56 0.012625 0.040273
GO:0048507 meristem development 2.38% (2/84) 3.56 0.012625 0.040273
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.38% (2/84) 3.53 0.013058 0.041499
GO:0000278 mitotic cell cycle 3.57% (3/84) 2.61 0.013299 0.042104
GO:0005575 cellular_component 96.43% (81/84) 0.12 0.013711 0.043247
GO:1901265 nucleoside phosphate binding 8.33% (7/84) 1.45 0.014307 0.044789
GO:0000166 nucleotide binding 8.33% (7/84) 1.45 0.014307 0.044789
GO:0032135 DNA insertion or deletion binding 1.19% (1/84) 6.04 0.015096 0.04556
GO:0001872 (1->3)-beta-D-glucan binding 1.19% (1/84) 6.04 0.015096 0.04556
GO:0009008 DNA-methyltransferase activity 1.19% (1/84) 6.04 0.015096 0.04556
GO:0003886 DNA (cytosine-5-)-methyltransferase activity 1.19% (1/84) 6.04 0.015096 0.04556
GO:0009652 thigmotropism 1.19% (1/84) 6.04 0.015096 0.04556
GO:0043570 maintenance of DNA repeat elements 1.19% (1/84) 6.04 0.015096 0.04556
GO:0035198 miRNA binding 1.19% (1/84) 6.04 0.015096 0.04556
GO:0006282 regulation of DNA repair 1.19% (1/84) 6.04 0.015096 0.04556
GO:0006406 mRNA export from nucleus 2.38% (2/84) 3.43 0.014856 0.046164
GO:0051028 mRNA transport 2.38% (2/84) 3.43 0.014856 0.046164
GO:0010014 meristem initiation 3.57% (3/84) 2.53 0.015355 0.046176
GO:0097747 RNA polymerase activity 2.38% (2/84) 3.39 0.015793 0.046986
GO:0034062 5'-3' RNA polymerase activity 2.38% (2/84) 3.39 0.015793 0.046986
GO:0004386 helicase activity 2.38% (2/84) 3.39 0.015793 0.046986
GO:0043168 anion binding 7.14% (6/84) 1.57 0.016016 0.047483
GO:0051130 positive regulation of cellular component organization 2.38% (2/84) 3.36 0.01627 0.047898
GO:0010638 positive regulation of organelle organization 2.38% (2/84) 3.36 0.01627 0.047898
GO:0006351 transcription, DNA-templated 3.57% (3/84) 2.49 0.016571 0.048275
GO:0097659 nucleic acid-templated transcription 3.57% (3/84) 2.49 0.016571 0.048275
GO:0033554 cellular response to stress 9.52% (8/84) 1.29 0.016476 0.048334
GO:0098727 maintenance of cell number 2.38% (2/84) 3.34 0.016754 0.048471
GO:0019827 stem cell population maintenance 2.38% (2/84) 3.34 0.016754 0.048471
GO:0046390 ribose phosphate biosynthetic process 3.57% (3/84) 2.47 0.017072 0.049053
GO:0009260 ribonucleotide biosynthetic process 3.57% (3/84) 2.47 0.017072 0.049053
GO:0050657 nucleic acid transport 2.38% (2/84) 3.28 0.018242 0.049371
GO:0050658 RNA transport 2.38% (2/84) 3.28 0.018242 0.049371
GO:0006405 RNA export from nucleus 2.38% (2/84) 3.28 0.018242 0.049371
GO:0046658 anchored component of plasma membrane 2.38% (2/84) 3.28 0.018242 0.049371
GO:0051236 establishment of RNA localization 2.38% (2/84) 3.28 0.018242 0.049371
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis 1.19% (1/84) 5.78 0.018088 0.049758
GO:0044770 cell cycle phase transition 1.19% (1/84) 5.78 0.018088 0.049758
GO:1901567 fatty acid derivative binding 1.19% (1/84) 5.78 0.018088 0.049758
GO:0032776 DNA methylation on cytosine 1.19% (1/84) 5.78 0.018088 0.049758
GO:0044772 mitotic cell cycle phase transition 1.19% (1/84) 5.78 0.018088 0.049758
GO:0120227 acyl-CoA binding 1.19% (1/84) 5.78 0.018088 0.049758
GO:0000062 fatty-acyl-CoA binding 1.19% (1/84) 5.78 0.018088 0.049758
GO:1902410 mitotic cytokinetic process 1.19% (1/84) 5.78 0.018088 0.049758
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis 1.19% (1/84) 5.78 0.018088 0.049758
GO:0032506 cytokinetic process 1.19% (1/84) 5.78 0.018088 0.049758
GO:0000914 phragmoplast assembly 1.19% (1/84) 5.78 0.018088 0.049758
GO:0004396 hexokinase activity 1.19% (1/84) 5.78 0.018088 0.049758
GO:0000775 chromosome, centromeric region 1.19% (1/84) 5.78 0.018088 0.049758
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_14 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_24 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_31 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_38 0.029 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_40 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_54 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_55 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_74 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_83 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_86 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_108 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_110 0.021 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_147 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_157 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_160 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_167 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_172 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_173 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_179 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_190 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_194 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_218 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_228 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_229 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_240 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Arabidopsis thaliana HCCA Cluster_247 0.023 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_6 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_28 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_81 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_92 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Chlamydomonas reinhardtii HCCA Cluster_128 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_6 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_20 0.036 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_22 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_40 0.018 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_128 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_130 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_146 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_158 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Marchantia polymorpha HCCA Cluster_169 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_14 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_17 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_47 0.017 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_62 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_102 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_124 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_146 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_191 0.016 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_201 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_207 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_244 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_259 0.025 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Physcomitrella patens HCCA Cluster_285 0.022 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_1 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_4 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_8 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_22 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_44 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_52 0.019 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_110 0.014 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_132 0.013 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_150 0.012 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_165 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Zygnema circumcarinatum HCCA Cluster_182 0.015 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci Compare
Sequences (84) (download table)

InterPro Domains

GO Terms

Family Terms