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  5. AT5G24610

AT5G24610


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0006410 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24610
Cluster HCCA: Cluster_22


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0003691 double-stranded telomeric DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006521 regulation of cellular amino acid metabolic process IEP HCCA
BP GO:0009269 response to desiccation IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009895 negative regulation of catabolic process IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010506 regulation of autophagy IEP HCCA
BP GO:0010507 negative regulation of autophagy IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031330 negative regulation of cellular catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033238 regulation of cellular amine metabolic process IEP HCCA
BP GO:0034635 glutathione transport IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
BP GO:0042939 tripeptide transport IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0051011 microtubule minus-end binding IEP HCCA
BP GO:0072337 modified amino acid transport IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT5G24610