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  5. AT5G28900

AT5G28900


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0000877 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G28900
Cluster HCCA: Cluster_245


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0001709 cell fate determination IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003923 GPI-anchor transamidase activity IEP HCCA
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP HCCA
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
MF GO:0004563 beta-N-acetylhexosaminidase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006671 phytosphingosine metabolic process IEP HCCA
BP GO:0006882 cellular zinc ion homeostasis IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 cellular amino acid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010098 suspensor development IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
MF GO:0015929 hexosaminidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017050 D-erythro-sphingosine kinase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
MF GO:0047769 arogenate dehydratase activity IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0055069 zinc ion homeostasis IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071249 cellular response to nitrate IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0080022 primary root development IEP HCCA
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:1904030 negative regulation of cyclin-dependent protein kinase activity IEP HCCA
BP GO:2001289 lipid X metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 316 416
PLAZA 3.0 Dicots AT5G28900