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  5. AT5G38386

AT5G38386


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000021 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38386
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G47915 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29930 No alias F-box/RNI-like superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G44180 No alias syntaxin-related family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G58820 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59170 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G59270 No alias FBD-like domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G12450 No alias FBD-like domain family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity IEP HCCA
MF GO:0008934 inositol monophosphate 1-phosphatase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
MF GO:0010347 L-galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019852 L-ascorbic acid metabolic process IEP HCCA
BP GO:0019853 L-ascorbic acid biosynthetic process IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
MF GO:0052745 inositol phosphate phosphatase activity IEP HCCA
MF GO:0052834 inositol monophosphate phosphatase activity IEP HCCA
MF GO:0070456 galactose-1-phosphate phosphatase activity IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
BP GO:1901334 lactone metabolic process IEP HCCA
BP GO:1901336 lactone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 3 39
PLAZA 3.0 Dicots AT5G38386