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  5. AT5G39620

AT5G39620


Description : RAB GTPase homolog G1


Gene families : OG_01_0017839 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G39620
Cluster HCCA: Cluster_30


Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000323 lytic vacuole IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004805 trehalose-phosphatase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008506 sucrose:proton symporter activity IEP HCCA
MF GO:0008515 sucrose transmembrane transporter activity IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
MF GO:0009669 sucrose:cation symporter activity IEP HCCA
BP GO:0009698 phenylpropanoid metabolic process IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010076 maintenance of floral meristem identity IEP HCCA
BP GO:0010077 maintenance of inflorescence meristem identity IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010152 pollen maturation IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
CC GO:0010282 senescence-associated vacuole IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015154 disaccharide transmembrane transporter activity IEP HCCA
MF GO:0015157 oligosaccharide transmembrane transporter activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
BP GO:0045490 pectin catabolic process IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048645 animal organ formation IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
MF GO:0050062 long-chain-fatty-acyl-CoA reductase activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080006 internode patterning IEP HCCA
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 7 174
PLAZA 3.0 Dicots AT5G39620