1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G40310

AT5G40310


Description : Exonuclease family protein


Gene families : OG_01_0007802 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40310
Cluster HCCA: Cluster_3


Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity ISS Interproscan
CC GO:0005622 intracellular anatomical structure ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000312 plastid small ribosomal subunit IEP HCCA
CC GO:0000314 organellar small ribosomal subunit IEP HCCA
CC GO:0000323 lytic vacuole IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006624 vacuolar protein processing IEP HCCA
BP GO:0006878 cellular copper ion homeostasis IEP HCCA
MF GO:0008429 phosphatidylethanolamine binding IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009900 dehiscence IEP HCCA
BP GO:0009901 anther dehiscence IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010315 auxin efflux IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010541 acropetal auxin transport IEP HCCA
BP GO:0010928 regulation of auxin mediated signaling pathway IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042304 regulation of fatty acid biosynthetic process IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0055070 copper ion homeostasis IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0080140 regulation of jasmonic acid metabolic process IEP HCCA
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 7 30
IPR013520 Exonuclease_RNaseT/DNA_pol3 142 269
PLAZA 3.0 Dicots AT5G40310